Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:29990427-30721542

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eml6 11 29743048 to 30026033 282985 - protein coding gene echinoderm microtubule associated protein like 6
Cpgi2678 11 30024390 to 30024991 601 CpG island CpG island 2678
Cpgi2679 11 30025638 to 30026343 705 CpG island CpG island 2679
Tssr107224 11 30025915 to 30025955 40 - TSS region transcription start site region 107224
Tssr107225 11 30078913 to 30078915 2 - TSS region transcription start site region 107225
Sptbn1 11 30099395 to 30268175 168780 - protein coding gene spectrin beta, non-erythrocytic 1
Tssr107226 11 30099463 to 30099478 15 - TSS region transcription start site region 107226
Tssr107227 11 30100318 to 30100322 4 - TSS region transcription start site region 107227
Tssr107228 11 30100361 to 30100364 3 - TSS region transcription start site region 107228
Tssr107229 11 30100408 to 30100499 91 - TSS region transcription start site region 107229
Gm29237 11 30106394 to 30108120 1726 + antisense lncRNA gene predicted gene 29237
Tssr107230 11 30107361 to 30107365 4 - TSS region transcription start site region 107230
Tssr107231 11 30114855 to 30114874 19 - TSS region transcription start site region 107231
Tssr100747 11 30137259 to 30137296 37 + TSS region transcription start site region 100747
Tssr107232 11 30138828 to 30138841 13 - TSS region transcription start site region 107232
Tssr100748 11 30139277 to 30139301 24 + TSS region transcription start site region 100748
Tssr3455 11 30139441 to 30139452 11 - TSS region transcription start site region 3455
Tssr107233 11 30150075 to 30150079 4 - TSS region transcription start site region 107233
Tssr100749 11 30153088 to 30153093 5 + TSS region transcription start site region 100749
Tssr107234 11 30159546 to 30159557 11 - TSS region transcription start site region 107234
Tssr107235 11 30159649 to 30159660 11 - TSS region transcription start site region 107235
Tssr107236 11 30159661 to 30159672 11 - TSS region transcription start site region 107236
Tssr107237 11 30159687 to 30159699 12 - TSS region transcription start site region 107237
Tssr107238 11 30160999 to 30161004 5 - TSS region transcription start site region 107238
Cpgi2680 11 30197687 to 30198623 936 CpG island CpG island 2680
Tssr107239 11 30197829 to 30197850 21 - TSS region transcription start site region 107239
Tssr107240 11 30197856 to 30197896 40 - TSS region transcription start site region 107240
Tssr107241 11 30197900 to 30197962 62 - TSS region transcription start site region 107241
Tssr107242 11 30197993 to 30198009 16 - TSS region transcription start site region 107242
Tssr107243 11 30198080 to 30198095 15 - TSS region transcription start site region 107243
Tssr107244 11 30198205 to 30198226 21 - TSS region transcription start site region 107244
Tssr107245 11 30198232 to 30198261 29 - TSS region transcription start site region 107245
Tssr107246 11 30212936 to 30212940 4 - TSS region transcription start site region 107246
Tssr107247 11 30213603 to 30213607 4 - TSS region transcription start site region 107247
Tssr100750 11 30221640 to 30221646 6 + TSS region transcription start site region 100750
Tssr107248 11 30243050 to 30243055 5 - TSS region transcription start site region 107248
Tssr107249 11 30248502 to 30248509 7 - TSS region transcription start site region 107249
Tssr107250 11 30253416 to 30253420 4 - TSS region transcription start site region 107250
Tssr107251 11 30256042 to 30256051 9 - TSS region transcription start site region 107251
Cpgi2681 11 30266915 to 30268971 2056 CpG island CpG island 2681
Gm8098 11 30267464 to 30280491 13027 + unclassified non-coding RNA gene predicted gene 8098
Tssr107252 11 30267616 to 30267628 12 - TSS region transcription start site region 107252
Tssr107253 11 30268116 to 30268123 7 - TSS region transcription start site region 107253
Tssr107254 11 30268137 to 30268162 25 - TSS region transcription start site region 107254
Tssr107255 11 30268171 to 30268191 20 - TSS region transcription start site region 107255
Tssr100751 11 30268295 to 30268336 41 + TSS region transcription start site region 100751
Tssr107256 11 30279442 to 30279465 23 - TSS region transcription start site region 107256
Gm40820 11 30314938 to 30333158 18220 + lncRNA gene predicted gene, 40820
Gm8102 11 30355427 to 30356542 1115 + pseudogene predicted gene 8102
Gm34695 11 30422226 to 30427093 4867 + lncRNA gene predicted gene, 34695
4930505A04Rik 11 30426006 to 30471827 45821 - protein coding gene RIKEN cDNA 4930505A04 gene
Tssr107257 11 30471792 to 30471820 28 - TSS region transcription start site region 107257
Tssr107258 11 30471855 to 30471860 5 - TSS region transcription start site region 107258
Tssr107259 11 30471874 to 30471886 12 - TSS region transcription start site region 107259
Acyp2 11 30505991 to 30649587 143596 - protein coding gene acylphosphatase 2, muscle type
Gm12096 11 30528295 to 30529398 1103 + pseudogene predicted gene 12096
Gm12098 11 30568182 to 30568898 716 - pseudogene predicted gene 12098
Gm12097 11 30572791 to 30574454 1663 - pseudogene predicted gene 12097
Tssr107260 11 30573115 to 30573144 29 - TSS region transcription start site region 107260
Tssr107261 11 30576918 to 30576922 4 - TSS region transcription start site region 107261
Cpgi2682 11 30649013 to 30649642 629 CpG island CpG island 2682
Tssr107262 11 30649364 to 30649374 10 - TSS region transcription start site region 107262
Tssr107263 11 30649375 to 30649413 38 - TSS region transcription start site region 107263
Tssr107264 11 30649417 to 30649445 28 - TSS region transcription start site region 107264
Tssr107265 11 30649453 to 30649470 17 - TSS region transcription start site region 107265
Tssr107266 11 30649485 to 30649498 13 - TSS region transcription start site region 107266
Tssr107267 11 30649510 to 30649523 13 - TSS region transcription start site region 107267
Tssr3456 11 30657364 to 30657365 1 + TSS region transcription start site region 3456
Gm12099 11 30705155 to 30705901 746 - pseudogene predicted gene 12099