Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:29557395-30090668

Filter by:
47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Clhc1 11 29547950 to 29578360 30410 + protein coding gene clathrin heavy chain linker domain containing 1
Gm12088 11 29595787 to 29597700 1913 + lincRNA gene predicted gene 12088
Gm12091 11 29601784 to 29602613 829 - pseudogene predicted gene 12091
Gm12092 11 29612324 to 29645509 33185 - lincRNA gene predicted gene 12092
Gm12093 11 29688668 to 29689798 1130 - pseudogene predicted gene 12093
Tssr100723 11 29692312 to 29692328 16 + TSS region transcription start site region 100723
Cpgi2676 11 29692701 to 29694167 1466 CpG island CpG island 2676
Tssr100724 11 29692937 to 29692997 60 + TSS region transcription start site region 100724
Rtn4 11 29692947 to 29744331 51384 + protein coding gene reticulon 4
Tssr100725 11 29693004 to 29693015 11 + TSS region transcription start site region 100725
Tssr100726 11 29693033 to 29693047 14 + TSS region transcription start site region 100726
Tssr100727 11 29693159 to 29693168 9 + TSS region transcription start site region 100727
Tssr100728 11 29704277 to 29704284 7 + TSS region transcription start site region 100728
Tssr100729 11 29706788 to 29706818 30 + TSS region transcription start site region 100729
Tssr100730 11 29706996 to 29707022 26 + TSS region transcription start site region 100730
Tssr100731 11 29707283 to 29707295 12 + TSS region transcription start site region 100731
Tssr100732 11 29707397 to 29707416 19 + TSS region transcription start site region 100732
Tssr100733 11 29707733 to 29707758 25 + TSS region transcription start site region 100733
Tssr100734 11 29710813 to 29710829 16 + TSS region transcription start site region 100734
Tssr100735 11 29712813 to 29712819 6 + TSS region transcription start site region 100735
Tssr100736 11 29715691 to 29715703 12 + TSS region transcription start site region 100736
Tssr100737 11 29718697 to 29718753 56 + TSS region transcription start site region 100737
Tssr100738 11 29718781 to 29718782 1 + TSS region transcription start site region 100738
Tssr100739 11 29718785 to 29718791 6 + TSS region transcription start site region 100739
Tssr100740 11 29718795 to 29718839 44 + TSS region transcription start site region 100740
Tssr100741 11 29719130 to 29719157 27 + TSS region transcription start site region 100741
Tssr100742 11 29731501 to 29731507 6 + TSS region transcription start site region 100742
Tssr100743 11 29741459 to 29741482 23 + TSS region transcription start site region 100743
Tssr100744 11 29742083 to 29742143 60 + TSS region transcription start site region 100744
Tssr100745 11 29742348 to 29742406 58 + TSS region transcription start site region 100745
Tssr107220 11 29742912 to 29742916 4 - TSS region transcription start site region 107220
Eml6 11 29743048 to 30026033 282985 - protein coding gene echinoderm microtubule associated protein like 6
Gm39671 11 29808889 to 29822298 13409 + lncRNA gene predicted gene, 39671
Tssr100746 11 29808903 to 29808925 22 + TSS region transcription start site region 100746
4931440F15Rik 11 29822395 to 29825668 3273 - protein coding gene RIKEN cDNA 4931440F15 gene
Cpgi2677 11 29824614 to 29825790 1176 CpG island CpG island 2677
Tssr107221 11 29825649 to 29825680 31 - TSS region transcription start site region 107221
Gm12094 11 29840375 to 29840846 471 + pseudogene predicted gene 12094
Gm22588 11 29849461 to 29849600 139 + snoRNA gene predicted gene, 22588
Tssr3454 11 29862506 to 29862512 6 + TSS region transcription start site region 3454
Tssr107222 11 29879760 to 29879781 21 - TSS region transcription start site region 107222
Tssr107223 11 29944789 to 29944798 9 - TSS region transcription start site region 107223
Gm12095 11 29982414 to 29983229 815 + pseudogene predicted gene 12095
Cpgi2678 11 30024390 to 30024991 601 CpG island CpG island 2678
Cpgi2679 11 30025638 to 30026343 705 CpG island CpG island 2679
Tssr107224 11 30025915 to 30025955 40 - TSS region transcription start site region 107224
Tssr107225 11 30078913 to 30078915 2 - TSS region transcription start site region 107225