Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:29506407-29546420

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14 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ccdc88a 11 29373658 to 29510808 137150 + protein coding gene coiled coil domain containing 88A
Tssr100716 11 29507692 to 29507703 11 + TSS region transcription start site region 100716
Tssr100717 11 29508479 to 29508521 42 + TSS region transcription start site region 100717
Tssr100718 11 29508600 to 29508613 13 + TSS region transcription start site region 100718
Prorsd1 11 29511757 to 29515033 3276 - protein coding gene prolyl-tRNA synthetase domain containing 1
Cpgi2673 11 29514763 to 29515311 548 CpG island CpG island 2673
Tssr107212 11 29515017 to 29515040 23 - TSS region transcription start site region 107212
Gm12089 11 29515086 to 29517355 2269 + antisense lncRNA gene predicted gene 12089
Cpgi2674 11 29526054 to 29526726 672 CpG island CpG island 2674
Tssr107213 11 29526343 to 29526379 36 - TSS region transcription start site region 107213
Tssr100719 11 29526407 to 29526420 13 + TSS region transcription start site region 100719
Mtif2 11 29526408 to 29545279 18871 + protein coding gene mitochondrial translational initiation factor 2
Tssr100720 11 29526423 to 29526474 51 + TSS region transcription start site region 100720
Rps27a 11 29545842 to 29548040 2198 - protein coding gene ribosomal protein S27A