Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:29487692-29527703

16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ccdc88a	11	29373658 to 29510808	137150	+	protein coding gene	coiled coil domain containing 88A
Tssr100713	11	29499541 to 29499545	4	+	TSS region	transcription start site region 100713
Tssr100714	11	29503977 to 29503989	12	+	TSS region	transcription start site region 100714
Tssr100715	11	29505560 to 29505571	11	+	TSS region	transcription start site region 100715
Tssr100716	11	29507692 to 29507703	11	+	TSS region	transcription start site region 100716
Tssr100717	11	29508479 to 29508521	42	+	TSS region	transcription start site region 100717
Tssr100718	11	29508600 to 29508613	13	+	TSS region	transcription start site region 100718
Prorsd1	11	29511757 to 29515033	3276	-	protein coding gene	prolyl-tRNA synthetase domain containing 1
Cpgi2673	11	29514763 to 29515311	548		CpG island	CpG island 2673
Tssr107212	11	29515017 to 29515040	23	-	TSS region	transcription start site region 107212
Gm12089	11	29515086 to 29517355	2269	+	antisense lncRNA gene	predicted gene 12089
Cpgi2674	11	29526054 to 29526726	672		CpG island	CpG island 2674
Tssr107213	11	29526343 to 29526379	36	-	TSS region	transcription start site region 107213
Tssr100719	11	29526407 to 29526420	13	+	TSS region	transcription start site region 100719
Mtif2	11	29526408 to 29545279	18871	+	protein coding gene	mitochondrial translational initiation factor 2
Tssr100720	11	29526423 to 29526474	51	+	TSS region	transcription start site region 100720