MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:28742976-28943105

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm12082	11	28729941 to 28751781	21840	+	lincRNA gene	predicted gene 12082
Mir216b	11	28746191 to 28746276	85	+	miRNA gene	microRNA 216b
Mir216c	11	28746198 to 28746266	68	-	miRNA gene	microRNA 216c
Gm40818	11	28754078 to 28772168	18090	+	lncRNA gene	predicted gene, 40818
Mir216a	11	28757012 to 28757083	71	+	miRNA gene	microRNA 216a
Tssr100685	11	28763468 to 28763472	4	+	TSS region	transcription start site region 100685
Mir217	11	28763728 to 28763835	107	+	miRNA gene	microRNA 217
Gm34185	11	28828959 to 28852908	23949	-	lncRNA gene	predicted gene, 34185
D11Mit83	11	28842976 to 28843105	129		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 83
D11Mit172	11	28852602 to 28852751	149		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 172
Cpgi2668	11	28853058 to 28853654	596		CpG island	CpG island 2668
Tssr100686	11	28853189 to 28853259	70	+	TSS region	transcription start site region 100686
Efemp1	11	28853205 to 28926743	73538	+	protein coding gene	epidermal growth factor-containing fibulin-like extracellular matrix protein 1
Tssr3451	11	28853758 to 28853773	15	+	TSS region	transcription start site region 3451
Tssr3452	11	28853792 to 28853798	6	+	TSS region	transcription start site region 3452
Tssr100687	11	28854300 to 28854322	22	+	TSS region	transcription start site region 100687
Tssr100688	11	28921464 to 28921496	32	+	TSS region	transcription start site region 100688