Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:28581564-28793276

16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ccdc85a	11	28385685 to 28584324	198639	-	protein coding gene	coiled-coil domain containing 85A
Cpgi2667	11	28583147 to 28584435	1288		CpG island	CpG island 2667
Tssr107205	11	28584074 to 28584105	31	-	TSS region	transcription start site region 107205
Tssr107206	11	28584219 to 28584229	10	-	TSS region	transcription start site region 107206
Tssr107207	11	28584260 to 28584309	49	-	TSS region	transcription start site region 107207
Gm34075	11	28628078 to 28637871	9793	-	lncRNA gene	predicted gene, 34075
2810471M01Rik	11	28681564 to 28693276	11712	+	lincRNA gene	RIKEN cDNA 2810471M01 gene
Tssr100683	11	28712331 to 28712342	11	+	TSS region	transcription start site region 100683
Gm12082	11	28729941 to 28751781	21840	+	lincRNA gene	predicted gene 12082
Tssr100684	11	28730472 to 28730482	10	+	TSS region	transcription start site region 100684
Mir216b	11	28746191 to 28746276	85	+	miRNA gene	microRNA 216b
Mir216c	11	28746198 to 28746266	68	-	miRNA gene	microRNA 216c
Gm40818	11	28754078 to 28772168	18090	+	lncRNA gene	predicted gene, 40818
Mir216a	11	28757012 to 28757083	71	+	miRNA gene	microRNA 216a
Tssr100685	11	28763468 to 28763472	4	+	TSS region	transcription start site region 100685
Mir217	11	28763728 to 28763835	107	+	miRNA gene	microRNA 217