Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:28536564-28838276

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ccdc85a 11 28385685 to 28584324 198639 - protein coding gene coiled-coil domain containing 85A
Tssr107204 11 28574671 to 28574675 4 - TSS region transcription start site region 107204
Cpgi2667 11 28583147 to 28584435 1288 CpG island CpG island 2667
Tssr107205 11 28584074 to 28584105 31 - TSS region transcription start site region 107205
Tssr107206 11 28584219 to 28584229 10 - TSS region transcription start site region 107206
Tssr107207 11 28584260 to 28584309 49 - TSS region transcription start site region 107207
Gm34075 11 28628078 to 28637871 9793 - lncRNA gene predicted gene, 34075
2810471M01Rik 11 28681564 to 28693276 11712 + lincRNA gene RIKEN cDNA 2810471M01 gene
Tssr100683 11 28712331 to 28712342 11 + TSS region transcription start site region 100683
Gm12082 11 28729941 to 28751781 21840 + lincRNA gene predicted gene 12082
Tssr100684 11 28730472 to 28730482 10 + TSS region transcription start site region 100684
Mir216b 11 28746191 to 28746276 85 + miRNA gene microRNA 216b
Mir216c 11 28746198 to 28746266 68 - miRNA gene microRNA 216c
Gm40818 11 28754078 to 28772168 18090 + lncRNA gene predicted gene, 40818
Mir216a 11 28757012 to 28757083 71 + miRNA gene microRNA 216a
Tssr100685 11 28763468 to 28763472 4 + TSS region transcription start site region 100685
Mir217 11 28763728 to 28763835 107 + miRNA gene microRNA 217
Gm34185 11 28828959 to 28852908 23949 - lncRNA gene predicted gene, 34185