MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:27964106-28714867

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
D11Mit230	11	28001232 to 28001464	232		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 230
Mcvq15	11	28001232 to 28001464	232		QTL	mean corpuscular volume QTL 15
Mchq19	11	28001232 to 28001464	232		QTL	mean corpuscular hemoglobin QTL 19
D11Mit185	11	28001274 to 28001464	190		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 185
Gm12080	11	28047876 to 28048959	1083	+	pseudogene	predicted gene 12080
Gm6685	11	28339106 to 28339867	761	-	pseudogene	predicted pseudogene 6685
Gm12081	11	28360362 to 28364339	3977	+	antisense lncRNA gene	predicted gene 12081
Cpgi2666	11	28365465 to 28365689	224		CpG island	CpG island 2666
Tssr107203	11	28365564 to 28365575	11	-	TSS region	transcription start site region 107203
Ccdc85a	11	28385685 to 28584324	198639	-	protein coding gene	coiled-coil domain containing 85A
Tssr107204	11	28574671 to 28574675	4	-	TSS region	transcription start site region 107204
Cpgi2667	11	28583147 to 28584435	1288		CpG island	CpG island 2667
Tssr107205	11	28584074 to 28584105	31	-	TSS region	transcription start site region 107205
Tssr107206	11	28584219 to 28584229	10	-	TSS region	transcription start site region 107206
Tssr107207	11	28584260 to 28584309	49	-	TSS region	transcription start site region 107207
Gm34075	11	28628078 to 28637871	9793	-	lncRNA gene	predicted gene, 34075
2810471M01Rik	11	28681564 to 28693276	11712	+	lincRNA gene	RIKEN cDNA 2810471M01 gene
Tssr100683	11	28712331 to 28712342	11	+	TSS region	transcription start site region 100683