Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:26456633-27117634

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fancl 11 26387084 to 26471883 84799 + protein coding gene Fanconi anemia, complementation group L
Vrk2 11 26471398 to 26594014 122616 - protein coding gene vaccinia related kinase 2
Tssr107189 11 26570147 to 26570151 4 - TSS region transcription start site region 107189
Tssr107190 11 26578477 to 26578496 19 - TSS region transcription start site region 107190
Tssr107191 11 26584752 to 26584799 47 - TSS region transcription start site region 107191
Cpgi2665 11 26593135 to 26593876 741 CpG island CpG island 2665
Gm6899 11 26593241 to 26593862 621 + protein coding gene predicted gene 6899
Tssr107192 11 26593607 to 26593663 56 - TSS region transcription start site region 107192
Tssr107193 11 26593672 to 26593685 13 - TSS region transcription start site region 107193
Tssr107194 11 26593708 to 26593748 40 - TSS region transcription start site region 107194
Tssr3450 11 26593754 to 26593761 7 - TSS region transcription start site region 3450
Tssr107195 11 26593889 to 26593900 11 - TSS region transcription start site region 107195
Tssr107196 11 26593915 to 26593943 28 - TSS region transcription start site region 107196
Tssr107197 11 26593945 to 26593965 20 - TSS region transcription start site region 107197
Tssr107198 11 26593970 to 26594007 37 - TSS region transcription start site region 107198
Tssr107199 11 26594639 to 26594653 14 - TSS region transcription start site region 107199
Tssr107200 11 26594654 to 26594717 63 - TSS region transcription start site region 107200
Gm12071 11 26712905 to 26713373 468 + pseudogene predicted gene 12071
Gm12070 11 26786633 to 26787634 1001 + pseudogene predicted gene 12070
Tssr100679 11 26816299 to 26816304 5 + TSS region transcription start site region 100679
Gm12072 11 26832804 to 26845457 12653 + pseudogene predicted gene 12072
Gm12073 11 26856387 to 26856910 523 - pseudogene predicted gene 12073
D11Mit344 11 26999283 to 26999384 101 DNA segment DNA Segment, Chr 11 Massachusetts Institute of Technology 344
Gm12074 11 27051697 to 27051915 218 + pseudogene predicted gene 12074
n-R5s68 11 27085126 to 27085207 81 + rRNA gene nuclear encoded rRNA 5S 68
Gm24850 11 27087017 to 27087135 118 - snoRNA gene predicted gene, 24850