Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:24416263-26207786

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm12068 11 24426246 to 24722646 296400 + lincRNA gene predicted gene 12068
D11Hjk14 11 24434119 to 24434480 361 DNA segment DNA segment, Chr 11, H. Jockusch 14
4933430M04Rik 11 24481909 to 24569951 88042 + lincRNA gene RIKEN cDNA 4933430M04 gene
Gm12067 11 24552438 to 24553962 1524 - pseudogene predicted gene 12067
Gm22787 11 24553986 to 24554058 72 - snRNA gene predicted gene, 22787
Tssr3449 11 24638068 to 24638072 4 + TSS region transcription start site region 3449
Gm25507 11 24679568 to 24679711 143 - miRNA gene predicted gene, 25507
Gm10466 11 24721006 to 24730722 9716 - lincRNA gene predicted gene 10466
Cpgi2662 11 24824101 to 24824293 192 CpG island CpG island 2662
Tssr100675 11 24855426 to 24855430 4 + TSS region transcription start site region 100675
Gm12665 11 24913237 to 24926385 13148 - lincRNA gene predicted gene 12665
Tssr107185 11 24926045 to 24926061 16 - TSS region transcription start site region 107185
D11Mit151 11 24948052 to 24948191 139 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 151
Tnbs2 11 24948052 to 35235853 10287801 QTL tri-nitrobenzene sulfonic acid susceptible 2
Gm39613 11 24951560 to 24954764 3204 + lncRNA gene predicted gene, 39613
D11Hjk25 11 25083717 to 25083915 198 DNA segment DNA segment, Chr 11, H. Jockusch 25
D11Mit81 11 25178679 to 25178865 186 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 81
Gm24255 11 25238588 to 25238715 127 - snoRNA gene predicted gene, 24255
Gm12069 11 25301263 to 25322786 21523 + lincRNA gene predicted gene 12069
4933427E13Rik 11 25326107 to 25367137 41030 + lincRNA gene RIKEN cDNA 4933427E13 gene
D11Hjk23 11 25397651 to 25398033 382 DNA segment DNA segment, Chr 11, H. Jockusch 23
D11Mit19 11 25422121 to 25422260 139 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 19
Bits3 11 25422121 to 25422260 139 QTL bitterness sensitivity 3
D11Hjk24 11 25459030 to 25459358 328 DNA segment DNA segment, Chr 11, H. Jockusch 24
5730522E02Rik 11 25616846 to 26210576 593730 - protein coding gene RIKEN cDNA 5730522E02 gene
Gm23514 11 25685140 to 25685269 129 + snoRNA gene predicted gene, 23514
D11Mit169 11 25885875 to 25886014 139 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 169
D11Mit229 11 25956097 to 25956218 121 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 229
Pgia28 11 25956097 to 25956218 121 QTL proteoglycan induced arthritis 28
Mndl2 11 25956097 to 27723304 1767207 QTL mandible length 2
D11Ertd540e 11 25989169 to 25989382 213 DNA segment DNA segment, Chr 11, ERATO Doi 540, expressed
D11Mit82 11 26061780 to 26061942 162 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 82
Nilac1 11 26061780 to 26061942 162 QTL nicotine induced locomotor activity 1
Bbaa7 11 26061780 to 44373868 18312088 QTL B.burgdorferi-associated arthritis 7
Tssr107186 11 26103809 to 26103846 37 - TSS region transcription start site region 107186
Tssr100676 11 26167713 to 26167716 3 + TSS region transcription start site region 100676
Mir6372 11 26202240 to 26202348 108 + miRNA gene microRNA 6372