Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:24078986-25029058

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bcl11a 11 24078056 to 24174123 96067 + protein coding gene B cell CLL/lymphoma 11A (zinc finger protein)
Cpgi2657 11 24078833 to 24079988 1155 CpG island CpG island 2657
Cpgi2658 11 24080508 to 24080912 404 CpG island CpG island 2658
Tssr100666 11 24080664 to 24080706 42 + TSS region transcription start site region 100666
Cpgi2659 11 24081176 to 24082153 977 CpG island CpG island 2659
Tssr100667 11 24098473 to 24098487 14 + TSS region transcription start site region 100667
Tssr100668 11 24098559 to 24098573 14 + TSS region transcription start site region 100668
Gm12064 11 24099688 to 24115405 15717 - antisense lncRNA gene predicted gene 12064
Tssr100669 11 24102587 to 24102591 4 + TSS region transcription start site region 100669
Tssr100670 11 24113739 to 24113752 13 + TSS region transcription start site region 100670
Tssr100671 11 24129066 to 24129072 6 + TSS region transcription start site region 100671
Tssr100672 11 24158300 to 24158311 11 + TSS region transcription start site region 100672
4930538E20Rik 11 24160528 to 24172824 12296 - antisense lncRNA gene RIKEN cDNA 4930538E20 gene
Cpgi2660 11 24163644 to 24164981 1337 CpG island CpG island 2660
Cpgi2661 11 24172719 to 24172929 210 CpG island CpG island 2661
Tssr107182 11 24172766 to 24172773 7 - TSS region transcription start site region 107182
Tssr107183 11 24172775 to 24172786 11 - TSS region transcription start site region 107183
Gm12065 11 24198737 to 24202624 3887 - lincRNA gene predicted gene 12065
Gm12066 11 24201418 to 24217601 16183 + lincRNA gene predicted gene 12066
Gm33440 11 24222209 to 24258739 36530 + lncRNA gene predicted gene, 33440
D11Mit152 11 24226273 to 24226405 132 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 152
Gm33379 11 24231310 to 24234419 3109 + lncRNA gene predicted gene, 33379
Tssr100673 11 24255699 to 24255715 16 + TSS region transcription start site region 100673
Tssr100674 11 24319966 to 24319970 4 + TSS region transcription start site region 100674
Tssr107184 11 24386032 to 24386033 1 - TSS region transcription start site region 107184
Gm12068 11 24426246 to 24722646 296400 + lincRNA gene predicted gene 12068
D11Hjk14 11 24434119 to 24434480 361 DNA segment DNA segment, Chr 11, H. Jockusch 14
4933430M04Rik 11 24481909 to 24569951 88042 + lincRNA gene RIKEN cDNA 4933430M04 gene
Gm12067 11 24552438 to 24553962 1524 - pseudogene predicted gene 12067
Gm22787 11 24553986 to 24554058 72 - snRNA gene predicted gene, 22787
Tssr3449 11 24638068 to 24638072 4 + TSS region transcription start site region 3449
Gm25507 11 24679568 to 24679711 143 - miRNA gene predicted gene, 25507
Gm10466 11 24721006 to 24730722 9716 - lincRNA gene predicted gene 10466
Cpgi2662 11 24824101 to 24824293 192 CpG island CpG island 2662
Tssr100675 11 24855426 to 24855430 4 + TSS region transcription start site region 100675
Gm12665 11 24913237 to 24926385 13148 - lincRNA gene predicted gene 12665
Tssr107185 11 24926045 to 24926061 16 - TSS region transcription start site region 107185
Tnbs2 11 24948052 to 35235853 10287801 QTL tri-nitrobenzene sulfonic acid susceptible 2
D11Mit151 11 24948052 to 24948191 139 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 151
Gm39613 11 24951560 to 24954764 3204 + lncRNA gene predicted gene, 39613