Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:23002115-23302124

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cct4 11 22990593 to 23003336 12743 + protein coding gene chaperonin containing Tcp1, subunit 4 (delta)
Tssr100597 11 23007523 to 23007536 13 + TSS region transcription start site region 100597
Fam161a 11 23007531 to 23030788 23257 + protein coding gene family with sequence similarity 161, member A
Cpgi2645 11 23007989 to 23008741 752 CpG island CpG island 2645
Tssr100598 11 23008337 to 23008391 54 + TSS region transcription start site region 100598
Tssr100599 11 23008420 to 23008500 80 + TSS region transcription start site region 100599
Tssr100600 11 23008521 to 23008532 11 + TSS region transcription start site region 100600
Tssr100601 11 23008542 to 23008553 11 + TSS region transcription start site region 100601
Tssr100602 11 23010976 to 23011001 25 + TSS region transcription start site region 100602
Tssr3445 11 23020281 to 23020288 7 + TSS region transcription start site region 3445
Tssr100603 11 23020346 to 23020355 9 + TSS region transcription start site region 100603
Tssr100604 11 23020464 to 23020486 22 + TSS region transcription start site region 100604
Tssr100605 11 23032837 to 23032849 12 + TSS region transcription start site region 100605
Gm23740 11 23063133 to 23063232 99 - rRNA gene predicted gene, 23740
Cpgi2646 11 23067478 to 23068178 700 CpG island CpG island 2646
Tssr100606 11 23067992 to 23068005 13 + TSS region transcription start site region 100606
Gm12059 11 23067998 to 23075574 7576 + unclassified non-coding RNA gene predicted gene 12059
Tssr107125 11 23069222 to 23069228 6 - TSS region transcription start site region 107125
Gm39610 11 23091879 to 23103869 11990 - lncRNA gene predicted gene, 39610
Tssr100607 11 23152083 to 23152086 3 + TSS region transcription start site region 100607
Tssr100608 11 23152099 to 23152106 7 + TSS region transcription start site region 100608
Tssr100609 11 23152115 to 23152124 9 + TSS region transcription start site region 100609
Tssr100610 11 23152125 to 23152133 8 + TSS region transcription start site region 100610
Tssr100611 11 23152135 to 23152145 10 + TSS region transcription start site region 100611
1700061J23Rik 11 23152140 to 23166375 14235 + lincRNA gene RIKEN cDNA 1700061J23 gene
Gm24398 11 23172798 to 23172906 108 - snoRNA gene predicted gene, 24398
D11Mit340 11 23238865 to 23238998 133 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology-340
Cpgi2647 11 23255094 to 23257674 2580 CpG island CpG island 2647
Xpo1 11 23255913 to 23297597 41684 + protein coding gene exportin 1
Tssr100612 11 23255920 to 23255976 56 + TSS region transcription start site region 100612
Tssr100613 11 23255980 to 23256000 20 + TSS region transcription start site region 100613
Tssr100614 11 23256001 to 23256105 104 + TSS region transcription start site region 100614
Tssr100615 11 23256566 to 23256580 14 + TSS region transcription start site region 100615
Tssr100616 11 23257456 to 23257464 8 + TSS region transcription start site region 100616
Tssr107126 11 23257478 to 23257487 9 - TSS region transcription start site region 107126
Tssr100617 11 23269613 to 23269620 7 + TSS region transcription start site region 100617
Tssr100618 11 23284303 to 23284320 17 + TSS region transcription start site region 100618
Tssr100619 11 23284655 to 23284669 14 + TSS region transcription start site region 100619