MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:22480381-22740396

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm12051	11	22483608 to 22491363	7755	+	lincRNA gene	predicted gene 12051
Gm46274	11	22498734 to 22511394	12660	-	lncRNA gene	predicted gene, 46274
Cpgi2638	11	22512200 to 22512956	756		CpG island	CpG island 2638
Tmem17	11	22512283 to 22519231	6948	+	protein coding gene	transmembrane protein 17
Gm26829	11	22600335 to 22610879	10544	-	lincRNA gene	predicted gene, 26829
Tssr100582	11	22608021 to 22608031	10	+	TSS region	transcription start site region 100582
Tssr107099	11	22610331 to 22610344	13	-	TSS region	transcription start site region 107099
Tssr107100	11	22610350 to 22610371	21	-	TSS region	transcription start site region 107100
Tssr107101	11	22610381 to 22610396	15	-	TSS region	transcription start site region 107101
Tssr107102	11	22610404 to 22610416	12	-	TSS region	transcription start site region 107102
Tssr107103	11	22613461 to 22613470	9	-	TSS region	transcription start site region 107103
Gm12052	11	22617408 to 22618487	1079	+	lincRNA gene	predicted gene 12052
Cpgi2639	11	22617601 to 22617920	319		CpG island	CpG island 2639
Tssr100583	11	22621325 to 22621342	17	+	TSS region	transcription start site region 100583
Gm12053	11	22626375 to 22626664	289	-	pseudogene	predicted gene 12053
Gm40816	11	22653845 to 22666524	12679	+	lncRNA gene	predicted gene, 40816
Gm12055	11	22729897 to 22732986	3089	-	lincRNA gene	predicted gene 12055
Gm12056	11	22734038 to 22737937	3899	+	lincRNA gene	predicted gene 12056
Tssr100584	11	22735511 to 22735516	5	+	TSS region	transcription start site region 100584