Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:22401325-22841342

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39609 11 22418233 to 22443373 25140 - lncRNA gene predicted gene, 39609
Gm12050 11 22438821 to 22439775 954 - lincRNA gene predicted gene 12050
Gm12051 11 22483608 to 22491363 7755 + lincRNA gene predicted gene 12051
Gm46274 11 22498734 to 22511394 12660 - lncRNA gene predicted gene, 46274
Cpgi2638 11 22512200 to 22512956 756 CpG island CpG island 2638
Tmem17 11 22512283 to 22519231 6948 + protein coding gene transmembrane protein 17
Gm26829 11 22600335 to 22610879 10544 - lincRNA gene predicted gene, 26829
Tssr100582 11 22608021 to 22608031 10 + TSS region transcription start site region 100582
Tssr107099 11 22610331 to 22610344 13 - TSS region transcription start site region 107099
Tssr107100 11 22610350 to 22610371 21 - TSS region transcription start site region 107100
Tssr107101 11 22610381 to 22610396 15 - TSS region transcription start site region 107101
Tssr107102 11 22610404 to 22610416 12 - TSS region transcription start site region 107102
Tssr107103 11 22613461 to 22613470 9 - TSS region transcription start site region 107103
Gm12052 11 22617408 to 22618487 1079 + lincRNA gene predicted gene 12052
Cpgi2639 11 22617601 to 22617920 319 CpG island CpG island 2639
Tssr100583 11 22621325 to 22621342 17 + TSS region transcription start site region 100583
Gm12053 11 22626375 to 22626664 289 - pseudogene predicted gene 12053
Gm40816 11 22653845 to 22666524 12679 + lncRNA gene predicted gene, 40816
Gm12055 11 22729897 to 22732986 3089 - lincRNA gene predicted gene 12055
Gm12056 11 22734038 to 22737937 3899 + lincRNA gene predicted gene 12056
Tssr100584 11 22735511 to 22735516 5 + TSS region transcription start site region 100584
Gm12057 11 22758599 to 22760025 1426 - pseudogene predicted gene 12057
Cpgi2640 11 22762583 to 22762847 264 CpG island CpG island 2640
Tssr107104 11 22765582 to 22765604 22 - TSS region transcription start site region 107104
Tssr107105 11 22779307 to 22779312 5 - TSS region transcription start site region 107105
Tssr107106 11 22779315 to 22779320 5 - TSS region transcription start site region 107106
Gm12058 11 22786811 to 22787247 436 - pseudogene predicted gene 12058
Tssr107107 11 22800032 to 22800042 10 - TSS region transcription start site region 107107
Tssr107108 11 22814062 to 22814079 17 - TSS region transcription start site region 107108
B3gnt2 11 22834739 to 22860336 25597 - protein coding gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
Gm28048 11 22834744 to 22982090 147346 - protein coding gene predicted gene, 28048
Tssr107109 11 22837168 to 22837179 11 - TSS region transcription start site region 107109
Gm20456 11 22839299 to 22842604 3305 + unclassified non-coding RNA gene predicted gene 20456