Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:22323608-22651363

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr107097 11 22342266 to 22342273 7 - TSS region transcription start site region 107097
Tssr107098 11 22342285 to 22342296 11 - TSS region transcription start site region 107098
Rpsa-ps3 11 22386292 to 22388196 1904 + pseudogene ribosomal protein SA, pseudogene 3
Gm39609 11 22418233 to 22443373 25140 - lncRNA gene predicted gene, 39609
Gm12050 11 22438821 to 22439775 954 - lincRNA gene predicted gene 12050
Gm12051 11 22483608 to 22491363 7755 + lincRNA gene predicted gene 12051
Gm46274 11 22498734 to 22511394 12660 - lncRNA gene predicted gene, 46274
Cpgi2638 11 22512200 to 22512956 756 CpG island CpG island 2638
Tmem17 11 22512283 to 22519231 6948 + protein coding gene transmembrane protein 17
Gm26829 11 22600335 to 22610879 10544 - lincRNA gene predicted gene, 26829
Tssr100582 11 22608021 to 22608031 10 + TSS region transcription start site region 100582
Tssr107099 11 22610331 to 22610344 13 - TSS region transcription start site region 107099
Tssr107100 11 22610350 to 22610371 21 - TSS region transcription start site region 107100
Tssr107101 11 22610381 to 22610396 15 - TSS region transcription start site region 107101
Tssr107102 11 22610404 to 22610416 12 - TSS region transcription start site region 107102
Tssr107103 11 22613461 to 22613470 9 - TSS region transcription start site region 107103
Gm12052 11 22617408 to 22618487 1079 + lincRNA gene predicted gene 12052
Cpgi2639 11 22617601 to 22617920 319 CpG island CpG island 2639
Tssr100583 11 22621325 to 22621342 17 + TSS region transcription start site region 100583
Gm12053 11 22626375 to 22626664 289 - pseudogene predicted gene 12053