Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:22168608-22806363

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ehbp1 11 22005825 to 22287078 281253 - protein coding gene EH domain binding protein 1
D11Hjk26 11 22168619 to 22169055 436 DNA segment DNA segment, Chr 11, H. Jockusch 26
Tssr107089 11 22171343 to 22171368 25 - TSS region transcription start site region 107089
Tssr107090 11 22171406 to 22171426 20 - TSS region transcription start site region 107090
Tssr100580 11 22184515 to 22184518 3 + TSS region transcription start site region 100580
A830051L15Rik 11 22222150 to 22225833 3683 unclassified gene RIKEN cDNA A830051L15 gene
Tssr107091 11 22246684 to 22246690 6 - TSS region transcription start site region 107091
Cpgi2637 11 22286321 to 22287485 1164 CpG island CpG island 2637
Tssr107092 11 22286805 to 22286818 13 - TSS region transcription start site region 107092
Tssr107093 11 22286821 to 22286865 44 - TSS region transcription start site region 107093
Tssr107094 11 22286923 to 22286969 46 - TSS region transcription start site region 107094
Tssr107095 11 22286995 to 22287005 10 - TSS region transcription start site region 107095
Tssr107096 11 22287069 to 22287090 21 - TSS region transcription start site region 107096
Tssr100581 11 22287398 to 22287421 23 + TSS region transcription start site region 100581
Gm18932 11 22300005 to 22301061 1056 + pseudogene predicted gene, 18932
Tssr107097 11 22342266 to 22342273 7 - TSS region transcription start site region 107097
Tssr107098 11 22342285 to 22342296 11 - TSS region transcription start site region 107098
Rpsa-ps3 11 22386292 to 22388196 1904 + pseudogene ribosomal protein SA, pseudogene 3
Gm39609 11 22418233 to 22443373 25140 - lncRNA gene predicted gene, 39609
Gm12050 11 22438821 to 22439775 954 - lincRNA gene predicted gene 12050
Gm12051 11 22483608 to 22491363 7755 + lincRNA gene predicted gene 12051
Gm46274 11 22498734 to 22511394 12660 - lncRNA gene predicted gene, 46274
Cpgi2638 11 22512200 to 22512956 756 CpG island CpG island 2638
Tmem17 11 22512283 to 22519231 6948 + protein coding gene transmembrane protein 17
Gm26829 11 22600335 to 22610879 10544 - lincRNA gene predicted gene, 26829
Tssr100582 11 22608021 to 22608031 10 + TSS region transcription start site region 100582
Tssr107099 11 22610331 to 22610344 13 - TSS region transcription start site region 107099
Tssr107100 11 22610350 to 22610371 21 - TSS region transcription start site region 107100
Tssr107101 11 22610381 to 22610396 15 - TSS region transcription start site region 107101
Tssr107102 11 22610404 to 22610416 12 - TSS region transcription start site region 107102
Tssr107103 11 22613461 to 22613470 9 - TSS region transcription start site region 107103
Gm12052 11 22617408 to 22618487 1079 + lincRNA gene predicted gene 12052
Cpgi2639 11 22617601 to 22617920 319 CpG island CpG island 2639
Tssr100583 11 22621325 to 22621342 17 + TSS region transcription start site region 100583
Gm12053 11 22626375 to 22626664 289 - pseudogene predicted gene 12053
Gm40816 11 22653845 to 22666524 12679 + lncRNA gene predicted gene, 40816
Gm12055 11 22729897 to 22732986 3089 - lincRNA gene predicted gene 12055
Gm12056 11 22734038 to 22737937 3899 + lincRNA gene predicted gene 12056
Tssr100584 11 22735511 to 22735516 5 + TSS region transcription start site region 100584
Gm12057 11 22758599 to 22760025 1426 - pseudogene predicted gene 12057
Cpgi2640 11 22762583 to 22762847 264 CpG island CpG island 2640
Tssr107104 11 22765582 to 22765604 22 - TSS region transcription start site region 107104
Tssr107105 11 22779307 to 22779312 5 - TSS region transcription start site region 107105
Tssr107106 11 22779315 to 22779320 5 - TSS region transcription start site region 107106
Gm12058 11 22786811 to 22787247 436 - pseudogene predicted gene 12058
Tssr107107 11 22800032 to 22800042 10 - TSS region transcription start site region 107107