Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:21863335-22133663

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Wdpcp 11 21572235 to 21898989 326754 + protein coding gene WD repeat containing planar cell polarity effector
Gm12047 11 21877007 to 21877950 943 - pseudogene predicted gene 12047
D11Hjk28 11 21896156 to 21897679 1523 DNA segment DNA segment, Chr 11, H. Jockusch 28
Tssr100577 11 21953103 to 21953112 9 + TSS region transcription start site region 100577
Rpl15-ps1 11 21953141 to 21953704 563 + pseudogene ribosomal protein L15, pseudogene 1
Tssr100578 11 21976569 to 21976572 3 + TSS region transcription start site region 100578
Gm7906 11 21976570 to 21977463 893 + pseudogene predicted gene 7906
Cpgi2632 11 21992730 to 21994163 1433 CpG island CpG island 2632
Otx1 11 21994764 to 22002897 8133 - protein coding gene orthodenticle homeobox 1
Cpgi2633 11 21996286 to 21997352 1066 CpG island CpG island 2633
Tssr107081 11 21997042 to 21997090 48 - TSS region transcription start site region 107081
Cpgi2634 11 21998335 to 21998663 328 CpG island CpG island 2634
Gm32517 11 21998501 to 22002643 4142 + lncRNA gene predicted gene, 32517
Cpgi2635 11 22000243 to 22003108 2865 CpG island CpG island 2635
Tssr107082 11 22001584 to 22001601 17 - TSS region transcription start site region 107082
Tssr107083 11 22001605 to 22001631 26 - TSS region transcription start site region 107083
Tssr100579 11 22001843 to 22001846 3 + TSS region transcription start site region 100579
Cpgi2636 11 22003492 to 22004058 566 CpG island CpG island 2636
Ehbp1 11 22005825 to 22287078 281253 - protein coding gene EH domain binding protein 1
Tssr107084 11 22007185 to 22007206 21 - TSS region transcription start site region 107084
Tssr107085 11 22007432 to 22007452 20 - TSS region transcription start site region 107085
Tssr107086 11 22048026 to 22048031 5 - TSS region transcription start site region 107086
Tssr107087 11 22058468 to 22058471 3 - TSS region transcription start site region 107087