Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:21432273-21712334

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm29812 11 21437838 to 21438938 1100 - pseudogene predicted gene, 29812
Gm12044 11 21451142 to 21451354 212 - pseudogene predicted gene 12044
Tssr100573 11 21456793 to 21456797 4 + TSS region transcription start site region 100573
Gm12045 11 21491314 to 21491817 503 + pseudogene predicted gene 12045
Gm12046 11 21493625 to 21493955 330 - pseudogene predicted gene 12046
4932414J04Rik 11 21494730 to 21511178 16448 - lincRNA gene RIKEN cDNA 4932414J04 gene
Mdh1 11 21556692 to 21571934 15242 - protein coding gene malate dehydrogenase 1, NAD (soluble)
Tssr107071 11 21557280 to 21557307 27 - TSS region transcription start site region 107071
Gm22990 11 21564561 to 21564649 88 - miRNA gene predicted gene, 22990
Tssr107072 11 21565888 to 21565907 19 - TSS region transcription start site region 107072
Tssr107073 11 21569097 to 21569100 3 - TSS region transcription start site region 107073
Tssr107074 11 21569968 to 21569971 3 - TSS region transcription start site region 107074
Cpgi2631 11 21571584 to 21572500 916 CpG island CpG island 2631
Tssr107075 11 21571774 to 21571780 6 - TSS region transcription start site region 107075
Tssr107076 11 21571786 to 21571797 11 - TSS region transcription start site region 107076
Tssr107077 11 21571798 to 21571827 29 - TSS region transcription start site region 107077
Tssr107078 11 21572037 to 21572049 12 - TSS region transcription start site region 107078
Tssr107079 11 21572193 to 21572211 18 - TSS region transcription start site region 107079
Tssr100574 11 21572221 to 21572232 11 + TSS region transcription start site region 100574
Wdpcp 11 21572235 to 21898989 326754 + protein coding gene WD repeat containing planar cell polarity effector
Tssr100575 11 21572273 to 21572334 61 + TSS region transcription start site region 100575
Tssr100576 11 21601141 to 21601144 3 + TSS region transcription start site region 100576
Pgam1-ps1 11 21683308 to 21684056 748 - pseudogene phosphoglycerate mutase 1, pseudogene 1
Tssr107080 11 21684073 to 21684105 32 - TSS region transcription start site region 107080