Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:21391314-21591817

24 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
D11Hjk11	11	21428638 to 21429180	542		DNA segment	DNA segment, Chr 11, H. Jockusch 11
D11Mit294	11	21429418 to 21429532	114		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 294
Eae44a	11	21429532 to 4557896	-16871636		QTL	experimental allergic encephalomyelitis susceptibility 44a
Gm29812	11	21437838 to 21438938	1100	-	pseudogene	predicted gene, 29812
Gm12044	11	21451142 to 21451354	212	-	pseudogene	predicted gene 12044
Tssr100573	11	21456793 to 21456797	4	+	TSS region	transcription start site region 100573
Gm12045	11	21491314 to 21491817	503	+	pseudogene	predicted gene 12045
Gm12046	11	21493625 to 21493955	330	-	pseudogene	predicted gene 12046
4932414J04Rik	11	21494730 to 21511178	16448	-	lincRNA gene	RIKEN cDNA 4932414J04 gene
Mdh1	11	21556692 to 21571934	15242	-	protein coding gene	malate dehydrogenase 1, NAD (soluble)
Tssr107071	11	21557280 to 21557307	27	-	TSS region	transcription start site region 107071
Gm22990	11	21564561 to 21564649	88	-	miRNA gene	predicted gene, 22990
Tssr107072	11	21565888 to 21565907	19	-	TSS region	transcription start site region 107072
Tssr107073	11	21569097 to 21569100	3	-	TSS region	transcription start site region 107073
Tssr107074	11	21569968 to 21569971	3	-	TSS region	transcription start site region 107074
Cpgi2631	11	21571584 to 21572500	916		CpG island	CpG island 2631
Tssr107075	11	21571774 to 21571780	6	-	TSS region	transcription start site region 107075
Tssr107076	11	21571786 to 21571797	11	-	TSS region	transcription start site region 107076
Tssr107077	11	21571798 to 21571827	29	-	TSS region	transcription start site region 107077
Tssr107078	11	21572037 to 21572049	12	-	TSS region	transcription start site region 107078
Tssr107079	11	21572193 to 21572211	18	-	TSS region	transcription start site region 107079
Tssr100574	11	21572221 to 21572232	11	+	TSS region	transcription start site region 100574
Wdpcp	11	21572235 to 21898989	326754	+	protein coding gene	WD repeat containing planar cell polarity effector
Tssr100575	11	21572273 to 21572334	61	+	TSS region	transcription start site region 100575