Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:21312838-21563938

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vps54 11 21239281 to 21321136 81855 + protein coding gene VPS54 GARP complex subunit
Ugp2 11 21321138 to 21371201 50063 - protein coding gene UDP-glucose pyrophosphorylase 2
Mir1933 11 21344588 to 21344675 87 - miRNA gene microRNA 1933
Tssr107063 11 21365883 to 21365892 9 - TSS region transcription start site region 107063
Gm12043 11 21370400 to 21374161 3761 + unclassified non-coding RNA gene predicted gene 12043
Cpgi2630 11 21370414 to 21371763 1349 CpG island CpG island 2630
Tssr107064 11 21370452 to 21370485 33 - TSS region transcription start site region 107064
Tssr107065 11 21370572 to 21370583 11 - TSS region transcription start site region 107065
Tssr107066 11 21370647 to 21370656 9 - TSS region transcription start site region 107066
Tssr107067 11 21370666 to 21370673 7 - TSS region transcription start site region 107067
Tssr107068 11 21370678 to 21370689 11 - TSS region transcription start site region 107068
Tssr100572 11 21370733 to 21370737 4 + TSS region transcription start site region 100572
Tssr3440 11 21370771 to 21370778 7 - TSS region transcription start site region 3440
Tssr3441 11 21370801 to 21370806 5 - TSS region transcription start site region 3441
Tssr3442 11 21370992 to 21371026 34 + TSS region transcription start site region 3442
Tssr107069 11 21371143 to 21371221 78 - TSS region transcription start site region 107069
Tssr107070 11 21371264 to 21371276 12 - TSS region transcription start site region 107070
D11Hjk11 11 21428638 to 21429180 542 DNA segment DNA segment, Chr 11, H. Jockusch 11
D11Mit294 11 21429418 to 21429532 114 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 294
Eae44a 11 21429532 to 4557896 -16871636 QTL experimental allergic encephalomyelitis susceptibility 44a
Gm29812 11 21437838 to 21438938 1100 - pseudogene predicted gene, 29812
Gm12044 11 21451142 to 21451354 212 - pseudogene predicted gene 12044
Tssr100573 11 21456793 to 21456797 4 + TSS region transcription start site region 100573
Gm12045 11 21491314 to 21491817 503 + pseudogene predicted gene 12045
Gm12046 11 21493625 to 21493955 330 - pseudogene predicted gene 12046
4932414J04Rik 11 21494730 to 21511178 16448 - lincRNA gene RIKEN cDNA 4932414J04 gene
Mdh1 11 21556692 to 21571934 15242 - protein coding gene malate dehydrogenase 1, NAD (soluble)
Tssr107071 11 21557280 to 21557307 27 - TSS region transcription start site region 107071