Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:21250414-21491763

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vps54 11 21239281 to 21321136 81855 + protein coding gene VPS54 GARP complex subunit
Tssr100568 11 21255931 to 21255936 5 + TSS region transcription start site region 100568
Tssr100569 11 21264994 to 21265005 11 + TSS region transcription start site region 100569
Gm18817 11 21265255 to 21266420 1165 + pseudogene predicted gene, 18817
Tssr100570 11 21272145 to 21272180 35 + TSS region transcription start site region 100570
Gm12039 11 21280045 to 21280224 179 - pseudogene predicted gene 12039
Tssr100571 11 21283384 to 21283432 48 + TSS region transcription start site region 100571
Tssr3439 11 21286493 to 21286506 13 + TSS region transcription start site region 3439
Gm12042 11 21295560 to 21295860 300 + pseudogene predicted gene 12042
Ugp2 11 21321138 to 21371201 50063 - protein coding gene UDP-glucose pyrophosphorylase 2
Mir1933 11 21344588 to 21344675 87 - miRNA gene microRNA 1933
Tssr107063 11 21365883 to 21365892 9 - TSS region transcription start site region 107063
Gm12043 11 21370400 to 21374161 3761 + unclassified non-coding RNA gene predicted gene 12043
Cpgi2630 11 21370414 to 21371763 1349 CpG island CpG island 2630
Tssr107064 11 21370452 to 21370485 33 - TSS region transcription start site region 107064
Tssr107065 11 21370572 to 21370583 11 - TSS region transcription start site region 107065
Tssr107066 11 21370647 to 21370656 9 - TSS region transcription start site region 107066
Tssr107067 11 21370666 to 21370673 7 - TSS region transcription start site region 107067
Tssr107068 11 21370678 to 21370689 11 - TSS region transcription start site region 107068
Tssr100572 11 21370733 to 21370737 4 + TSS region transcription start site region 100572
Tssr3440 11 21370771 to 21370778 7 - TSS region transcription start site region 3440
Tssr3441 11 21370801 to 21370806 5 - TSS region transcription start site region 3441
Tssr3442 11 21370992 to 21371026 34 + TSS region transcription start site region 3442
Tssr107069 11 21371143 to 21371221 78 - TSS region transcription start site region 107069
Tssr107070 11 21371264 to 21371276 12 - TSS region transcription start site region 107070
D11Hjk11 11 21428638 to 21429180 542 DNA segment DNA segment, Chr 11, H. Jockusch 11
D11Mit294 11 21429418 to 21429532 114 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 294
Eae44a 11 21429532 to 4557896 -16871636 QTL experimental allergic encephalomyelitis susceptibility 44a
Gm29812 11 21437838 to 21438938 1100 - pseudogene predicted gene, 29812
Gm12044 11 21451142 to 21451354 212 - pseudogene predicted gene 12044
Tssr100573 11 21456793 to 21456797 4 + TSS region transcription start site region 100573
Gm12045 11 21491314 to 21491817 503 + pseudogene predicted gene 12045