Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:21124301-21364307

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Peli1 11 21091324 to 21150327 59003 + protein coding gene pellino 1
Tssr100549 11 21136666 to 21136669 3 + TSS region transcription start site region 100549
Tssr100550 11 21140643 to 21140672 29 + TSS region transcription start site region 100550
Tssr100551 11 21148820 to 21148834 14 + TSS region transcription start site region 100551
Tssr100552 11 21149059 to 21149083 24 + TSS region transcription start site region 100552
Tssr100553 11 21149089 to 21149102 13 + TSS region transcription start site region 100553
Tssr100554 11 21149202 to 21149213 11 + TSS region transcription start site region 100554
Tssr100555 11 21149713 to 21149724 11 + TSS region transcription start site region 100555
Tssr107057 11 21174602 to 21174626 24 - TSS region transcription start site region 107057
Gm22600 11 21197708 to 21197976 268 - unclassified non-coding RNA gene predicted gene, 22600
Gm12040 11 21206410 to 21206946 536 - pseudogene predicted gene 12040
Tssr107058 11 21207035 to 21207049 14 - TSS region transcription start site region 107058
Tssr100556 11 21219534 to 21219575 41 + TSS region transcription start site region 100556
Tssr100557 11 21220981 to 21221015 34 + TSS region transcription start site region 100557
Gm12041 11 21227655 to 21228256 601 + pseudogene predicted gene 12041
Tssr107059 11 21238173 to 21238176 3 - TSS region transcription start site region 107059
Cpgi2629 11 21238418 to 21239680 1262 CpG island CpG island 2629
Tssr100558 11 21238515 to 21238536 21 + TSS region transcription start site region 100558
Tssr100559 11 21238564 to 21238579 15 + TSS region transcription start site region 100559
Tssr100560 11 21238689 to 21238745 56 + TSS region transcription start site region 100560
Tssr100561 11 21238875 to 21238966 91 + TSS region transcription start site region 100561
Tssr100562 11 21239103 to 21239147 44 + TSS region transcription start site region 100562
Tssr100563 11 21239158 to 21239178 20 + TSS region transcription start site region 100563
Tssr100564 11 21239279 to 21239302 23 + TSS region transcription start site region 100564
Vps54 11 21239281 to 21321136 81855 + protein coding gene VPS54 GARP complex subunit
Tssr107060 11 21239331 to 21239353 22 - TSS region transcription start site region 107060
Tssr107061 11 21239530 to 21239548 18 - TSS region transcription start site region 107061
Tssr107062 11 21239694 to 21239716 22 - TSS region transcription start site region 107062
Tssr100565 11 21239973 to 21239977 4 + TSS region transcription start site region 100565
Tssr100566 11 21242627 to 21242677 50 + TSS region transcription start site region 100566
Tssr100567 11 21244301 to 21244307 6 + TSS region transcription start site region 100567
Gm23582 11 21249422 to 21249560 138 - snoRNA gene predicted gene, 23582
Tssr100568 11 21255931 to 21255936 5 + TSS region transcription start site region 100568
Tssr100569 11 21264994 to 21265005 11 + TSS region transcription start site region 100569
Gm18817 11 21265255 to 21266420 1165 + pseudogene predicted gene, 18817
Tssr100570 11 21272145 to 21272180 35 + TSS region transcription start site region 100570
Gm12039 11 21280045 to 21280224 179 - pseudogene predicted gene 12039
Tssr100571 11 21283384 to 21283432 48 + TSS region transcription start site region 100571
Tssr3439 11 21286493 to 21286506 13 + TSS region transcription start site region 3439
Gm12042 11 21295560 to 21295860 300 + pseudogene predicted gene 12042
Ugp2 11 21321138 to 21371201 50063 - protein coding gene UDP-glucose pyrophosphorylase 2
Mir1933 11 21344588 to 21344675 87 - miRNA gene microRNA 1933