Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:20777339-21106444

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm32213 11 20794620 to 20821244 26624 + lncRNA gene predicted gene, 32213
Lgalsl 11 20823576 to 20831056 7480 - protein coding gene lectin, galactoside binding-like
Cpgi2627 11 20830278 to 20831680 1402 CpG island CpG island 2627
Tssr3438 11 20830778 to 20830801 23 - TSS region transcription start site region 3438
Tssr107046 11 20831009 to 20831053 44 - TSS region transcription start site region 107046
Tssr107047 11 20831060 to 20831074 14 - TSS region transcription start site region 107047
Tssr107048 11 20831173 to 20831189 16 - TSS region transcription start site region 107048
Tssr107049 11 20831204 to 20831219 15 - TSS region transcription start site region 107049
Tssr107050 11 20831223 to 20831265 42 - TSS region transcription start site region 107050
Tssr107051 11 20831310 to 20831332 22 - TSS region transcription start site region 107051
Gm12037 11 20831481 to 20831919 438 - lincRNA gene predicted gene 12037
Gm12038 11 20847476 to 20847682 206 - pseudogene predicted gene 12038
Gm22807 11 20847753 to 20847881 128 - snoRNA gene predicted gene, 22807
Tssr107052 11 20881487 to 20881508 21 - TSS region transcription start site region 107052
Gm39608 11 20894468 to 20898879 4411 - lncRNA gene predicted gene, 39608
Tssr107053 11 20898685 to 20898693 8 - TSS region transcription start site region 107053
Tssr107054 11 20898726 to 20898743 17 - TSS region transcription start site region 107054
D11Hjk10 11 20908915 to 20909024 109 DNA segment DNA segment, Chr 11, H. Jockusch 10
Gm46273 11 20911601 to 20917578 5977 - lncRNA gene predicted gene, 46273
Tssr100526 11 20917294 to 20917310 16 + TSS region transcription start site region 100526
Gm32293 11 20917339 to 20966444 49105 + lncRNA gene predicted gene, 32293
Gm23681 11 20937576 to 20937701 125 - miRNA gene predicted gene, 23681
D11Hjk30 11 20957785 to 20958308 523 DNA segment DNA segment, Chr 11, H. Jockusch 30
Tssr107055 11 21046282 to 21046329 47 - TSS region transcription start site region 107055
Tssr100527 11 21048157 to 21048171 14 + TSS region transcription start site region 100527
Tssr100528 11 21048250 to 21048259 9 + TSS region transcription start site region 100528
Tssr100529 11 21048900 to 21048937 37 + TSS region transcription start site region 100529
Gm40824 11 21050355 to 21110192 59837 + protein coding gene predicted gene, 40824
Cpgi2628 11 21090941 to 21092199 1258 CpG island CpG island 2628
Tssr100530 11 21091135 to 21091156 21 + TSS region transcription start site region 100530
Tssr100531 11 21091297 to 21091339 42 + TSS region transcription start site region 100531
Peli1 11 21091324 to 21150327 59003 + protein coding gene pellino 1
Tssr100532 11 21091371 to 21091401 30 + TSS region transcription start site region 100532
Tssr107056 11 21091964 to 21091973 9 - TSS region transcription start site region 107056
Tssr100533 11 21092549 to 21092560 11 + TSS region transcription start site region 100533
Tssr100534 11 21092940 to 21092971 31 + TSS region transcription start site region 100534
Tssr100535 11 21093030 to 21093033 3 + TSS region transcription start site region 100535
Tssr100536 11 21095731 to 21095748 17 + TSS region transcription start site region 100536
Tssr100537 11 21095814 to 21095822 8 + TSS region transcription start site region 100537
Tssr100538 11 21097358 to 21097377 19 + TSS region transcription start site region 100538
2610024D14Rik 11 21099534 to 21099827 293 + pseudogene RIKEN cDNA 2610024D14 gene
Tssr100539 11 21101024 to 21101058 34 + TSS region transcription start site region 100539
Tssr100540 11 21102503 to 21102532 29 + TSS region transcription start site region 100540
Tssr100541 11 21105926 to 21105937 11 + TSS region transcription start site region 100541
Tssr100542 11 21105960 to 21105979 19 + TSS region transcription start site region 100542
Tssr100543 11 21105997 to 21106020 23 + TSS region transcription start site region 100543