Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:20641311-20843384

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sertad2 11 20543253 to 20653021 109768 + protein coding gene SERTA domain containing 2
Tssr100517 11 20647149 to 20647156 7 + TSS region transcription start site region 100517
Tssr100518 11 20647159 to 20647179 20 + TSS region transcription start site region 100518
Tssr100519 11 20647234 to 20647239 5 + TSS region transcription start site region 100519
Tssr100520 11 20647248 to 20647253 5 + TSS region transcription start site region 100520
Cpgi2625 11 20656820 to 20657084 264 CpG island CpG island 2625
Tssr107031 11 20656879 to 20656905 26 - TSS region transcription start site region 107031
Aftph 11 20685084 to 20741556 56472 - protein coding gene aftiphilin
4833432P19Rik 11 20693702 to 20694940 1238 unclassified gene RIKEN cDNA 4833432P19 gene
Tssr107032 11 20694915 to 20694919 4 - TSS region transcription start site region 107032
Tssr107033 11 20699581 to 20699594 13 - TSS region transcription start site region 107033
Tssr107034 11 20700847 to 20700851 4 - TSS region transcription start site region 107034
Tssr107035 11 20712220 to 20712238 18 - TSS region transcription start site region 107035
Tssr107036 11 20712242 to 20712247 5 - TSS region transcription start site region 107036
Tssr107037 11 20712256 to 20712329 73 - TSS region transcription start site region 107037
Gm12036 11 20729420 to 20729949 529 + pseudogene predicted gene 12036
Cpgi2626 11 20740520 to 20741957 1437 CpG island CpG island 2626
Tssr100521 11 20740587 to 20740645 58 + TSS region transcription start site region 100521
Tssr100522 11 20740654 to 20740681 27 + TSS region transcription start site region 100522
Tssr100523 11 20740693 to 20740725 32 + TSS region transcription start site region 100523
Gm46272 11 20741311 to 20743384 2073 + protein coding gene predicted gene, 46272
Tssr107038 11 20741354 to 20741365 11 - TSS region transcription start site region 107038
Tssr107039 11 20741447 to 20741524 77 - TSS region transcription start site region 107039
Tssr107040 11 20741580 to 20741622 42 - TSS region transcription start site region 107040
Tssr100524 11 20741754 to 20741787 33 + TSS region transcription start site region 100524
4930434J08Rik 11 20741763 to 20744965 3202 unclassified gene RIKEN cDNA 4930434J08 gene
Tssr107041 11 20741847 to 20741908 61 - TSS region transcription start site region 107041
Tssr107042 11 20741933 to 20741944 11 - TSS region transcription start site region 107042
Tssr107043 11 20741981 to 20741992 11 - TSS region transcription start site region 107043
Tssr107044 11 20742004 to 20742015 11 - TSS region transcription start site region 107044
Tssr100525 11 20742299 to 20742309 10 + TSS region transcription start site region 100525
Tssr107045 11 20770753 to 20770757 4 - TSS region transcription start site region 107045
Gm32213 11 20794620 to 20821244 26624 + lncRNA gene predicted gene, 32213
Lgalsl 11 20823576 to 20831056 7480 - protein coding gene lectin, galactoside binding-like
Cpgi2627 11 20830278 to 20831680 1402 CpG island CpG island 2627
Tssr3438 11 20830778 to 20830801 23 - TSS region transcription start site region 3438
Tssr107046 11 20831009 to 20831053 44 - TSS region transcription start site region 107046
Tssr107047 11 20831060 to 20831074 14 - TSS region transcription start site region 107047
Tssr107048 11 20831173 to 20831189 16 - TSS region transcription start site region 107048
Tssr107049 11 20831204 to 20831219 15 - TSS region transcription start site region 107049
Tssr107050 11 20831223 to 20831265 42 - TSS region transcription start site region 107050
Tssr107051 11 20831310 to 20831332 22 - TSS region transcription start site region 107051
Gm12037 11 20831481 to 20831919 438 - lincRNA gene predicted gene 12037