Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:19366344-20136728

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm12026 11 19383685 to 19384708 1023 + pseudogene predicted gene 12026
D11Mit295 11 19572315 to 19572430 115 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 295
Tssr100478 11 19582828 to 19582834 6 + TSS region transcription start site region 100478
Gm39601 11 19613814 to 19618743 4929 - lncRNA gene predicted gene, 39601
Gm12027 11 19626761 to 19628061 1300 - lincRNA gene predicted gene 12027
D11Hjk21 11 19651198 to 19651496 298 DNA segment DNA segment, Chr 11, H. Jockusch 21
Gm23386 11 19693155 to 19693298 143 - snoRNA gene predicted gene, 23386
Cpgi2610 11 19713698 to 19713987 289 CpG island CpG island 2610
D11Nds14 11 19719780 to 19719964 184 DNA segment DNA segment, Chr 11, Nuffield Department of Surgery 14
Tssr100479 11 19720213 to 19720219 6 + TSS region transcription start site region 100479
Cocrb11 11 19720355 to 19721472 1117 QTL cocaine related behavior 11
Glns-ps1 11 19720355 to 19721472 1117 + pseudogene glutamine synthetase pseudogene 1
Gm39602 11 19725864 to 19742707 16843 - lncRNA gene predicted gene, 39602
D11Mit79 11 19745817 to 19745966 149 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 79
Gm12028 11 19749419 to 19750066 647 - pseudogene predicted gene 12028
D11Hjk22 11 19751344 to 19751728 384 DNA segment DNA segment, Chr 11, H. Jockusch 22
Gm12029 11 19783652 to 19784483 831 + pseudogene predicted gene 12029
Cpgi2611 11 19827257 to 19827485 228 CpG island CpG island 2611
Cpgi2612 11 19919869 to 19920695 826 CpG island CpG island 2612
Cpgi2613 11 19924076 to 19926190 2114 CpG island CpG island 2613
Tssr3436 11 19924096 to 19924107 11 + TSS region transcription start site region 3436
Tssr100480 11 19924168 to 19924184 16 + TSS region transcription start site region 100480
Tssr100481 11 19924265 to 19924276 11 + TSS region transcription start site region 100481
Tssr100482 11 19924354 to 19924368 14 + TSS region transcription start site region 100482
Tssr100483 11 19924403 to 19924458 55 + TSS region transcription start site region 100483
Spred2 11 19924442 to 20024026 99584 + protein coding gene sprouty-related EVH1 domain containing 2
Tssr107001 11 19925497 to 19925512 15 - TSS region transcription start site region 107001
Tssr100484 11 19925969 to 19925974 5 + TSS region transcription start site region 100484
Tssr100485 11 19954185 to 19954189 4 + TSS region transcription start site region 100485
Tssr100486 11 19983135 to 19983146 11 + TSS region transcription start site region 100486
Tssr3437 11 19996945 to 19996960 15 - TSS region transcription start site region 3437
Cpgi2614 11 19998088 to 19998417 329 CpG island CpG island 2614
Cpgi2615 11 20020662 to 20021599 937 CpG island CpG island 2615
Tssr100487 11 20021822 to 20021825 3 + TSS region transcription start site region 100487
Gm39603 11 20024830 to 20036612 11782 - lncRNA gene predicted gene, 39603
Gm32080 11 20036663 to 20040477 3814 + lncRNA gene predicted gene, 32080
Tssr100488 11 20039075 to 20039078 3 + TSS region transcription start site region 100488
Actr2 11 20062304 to 20112913 50609 - protein coding gene ARP2 actin-related protein 2
Tssr107002 11 20063023 to 20063034 11 - TSS region transcription start site region 107002
Tssr107003 11 20063674 to 20063699 25 - TSS region transcription start site region 107003
Tssr107004 11 20063918 to 20063931 13 - TSS region transcription start site region 107004
Tssr107005 11 20064233 to 20064265 32 - TSS region transcription start site region 107005
Tssr107006 11 20077234 to 20077250 16 - TSS region transcription start site region 107006
Tssr107007 11 20080601 to 20080605 4 - TSS region transcription start site region 107007
Tssr107008 11 20083959 to 20084008 49 - TSS region transcription start site region 107008
Tssr107009 11 20089624 to 20089635 11 - TSS region transcription start site region 107009
Tssr107010 11 20089638 to 20089647 9 - TSS region transcription start site region 107010
Cpgi2616 11 20112280 to 20113386 1106 CpG island CpG island 2616
Tssr100489 11 20112447 to 20112480 33 + TSS region transcription start site region 100489
Tssr100490 11 20112486 to 20112498 12 + TSS region transcription start site region 100490
Tssr107011 11 20112876 to 20112925 49 - TSS region transcription start site region 107011
Tssr100491 11 20113059 to 20113094 35 + TSS region transcription start site region 100491