Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:18742021-19012407

Filter by:
19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm31674 11 18747793 to 18822973 75180 + lncRNA gene predicted gene, 31674
Gm28401 11 18752558 to 18756757 4199 - lincRNA gene predicted gene 28401
Gm23021 11 18802254 to 18802422 168 - snRNA gene predicted gene, 23021
Tssr3434 11 18829744 to 18829753 9 + TSS region transcription start site region 3434
8430419K02Rik 11 18845851 to 18872180 26329 - lncRNA gene RIKEN cDNA 8430419K02 gene
Cpgi2599 11 18871271 to 18872080 809 CpG island CpG island 2599
Cpgi2600 11 18877021 to 18877407 386 CpG island CpG island 2600
Cpgi2601 11 18877593 to 18878174 581 CpG island CpG island 2601
Meis1 11 18879817 to 19018985 139168 - protein coding gene Meis homeobox 1
Gm37818 11 18884623 to 18887791 3168 - unclassified gene predicted gene, 37818
Tssr106987 11 18885819 to 18885845 26 - TSS region transcription start site region 106987
2900018N21Rik 11 18888261 to 18889840 1579 - unclassified gene RIKEN cDNA 2900018N21 gene
Tssr106988 11 18890985 to 18891002 17 - TSS region transcription start site region 106988
Tssr106989 11 18891119 to 18891131 12 - TSS region transcription start site region 106989
Tssr106990 11 18891181 to 18891201 20 - TSS region transcription start site region 106990
2610001A08Rik 11 19005607 to 19006473 866 - unclassified gene RIKEN cDNA 2610001A08 gene
Cpgi2602 11 19007786 to 19008445 659 CpG island CpG island 2602
Tssr3435 11 19009079 to 19009098 19 + TSS region transcription start site region 3435
Gm16140 11 19009128 to 19011183 2055 + antisense lncRNA gene predicted gene 16140