Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:17952202-18472205

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Etaa1 11 17938756 to 17953875 15119 - protein coding gene Ewing tumor-associated antigen 1
Cpgi2598 11 17953221 to 17954059 838 CpG island CpG island 2598
Tssr100472 11 17953492 to 17953514 22 + TSS region transcription start site region 100472
Tssr106984 11 17953861 to 17953897 36 - TSS region transcription start site region 106984
Tssr100473 11 17953968 to 17953980 12 + TSS region transcription start site region 100473
Etaa1os 11 17953970 to 17959578 5608 + antisense lncRNA gene Ewing tumor-associated antigen 1, opposite strand
Tssr100474 11 17953984 to 17954031 47 + TSS region transcription start site region 100474
Gm12017 11 17973788 to 17974790 1002 - pseudogene predicted gene 12017
D11Mit228 11 17999286 to 17999420 134 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 228
Gm31505 11 17999675 to 18005178 5503 + lncRNA gene predicted gene, 31505
Gm12018 11 18095986 to 18103384 7398 + lincRNA gene predicted gene 12018
Gm12019 11 18206413 to 18206944 531 - pseudogene predicted gene 12019
Tssr100475 11 18212202 to 18212205 3 + TSS region transcription start site region 100475
D11Mit162 11 18246470 to 18246593 123 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 162
Gm12020 11 18325636 to 18327671 2035 - pseudogene predicted gene 12020
Tssr106985 11 18327044 to 18327067 23 - TSS region transcription start site region 106985
Tssr106986 11 18327256 to 18327259 3 - TSS region transcription start site region 106986
Gm37869 11 18436242 to 18436836 594 + unclassified gene predicted gene, 37869
Gm12022 11 18468403 to 18493277 24874 - lincRNA gene predicted gene 12022