Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:16951934-17179372

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fbxo48 11 16951375 to 16954772 3397 + protein coding gene F-box protein 48
6230414M07Rik 11 16958788 to 16960036 1248 unclassified gene RIKEN cDNA 6230414M07 gene
Plek 11 16971206 to 17008718 37512 - protein coding gene pleckstrin
Tssr106949 11 16972228 to 16972250 22 - TSS region transcription start site region 106949
Tssr106950 11 16972253 to 16972274 21 - TSS region transcription start site region 106950
Tssr106951 11 16972754 to 16972827 73 - TSS region transcription start site region 106951
Tssr106952 11 16972831 to 16972854 23 - TSS region transcription start site region 106952
Tssr106953 11 16972879 to 16972919 40 - TSS region transcription start site region 106953
Tssr106954 11 16972923 to 16973000 77 - TSS region transcription start site region 106954
Tssr106955 11 16973159 to 16973177 18 - TSS region transcription start site region 106955
Tssr106956 11 16973211 to 16973244 33 - TSS region transcription start site region 106956
Tssr106957 11 16973255 to 16973302 47 - TSS region transcription start site region 106957
Tssr106958 11 16973439 to 16973499 60 - TSS region transcription start site region 106958
Tssr106959 11 16973926 to 16973988 62 - TSS region transcription start site region 106959
Tssr106960 11 16974003 to 16974017 14 - TSS region transcription start site region 106960
Tssr106961 11 16974024 to 16974097 73 - TSS region transcription start site region 106961
Tssr106962 11 16974108 to 16974132 24 - TSS region transcription start site region 106962
Tssr106963 11 16981826 to 16981840 14 - TSS region transcription start site region 106963
Tssr106964 11 16981848 to 16981933 85 - TSS region transcription start site region 106964
Tssr106965 11 16983220 to 16983269 49 - TSS region transcription start site region 106965
Tssr106966 11 16984041 to 16984068 27 - TSS region transcription start site region 106966
Tssr106967 11 16985347 to 16985387 40 - TSS region transcription start site region 106967
Tssr106968 11 16990135 to 16990189 54 - TSS region transcription start site region 106968
Tssr106969 11 16992966 to 16992981 15 - TSS region transcription start site region 106969
Tssr106970 11 16994737 to 16994776 39 - TSS region transcription start site region 106970
Tssr106971 11 16995231 to 16995266 35 - TSS region transcription start site region 106971
Tssr106972 11 16995311 to 16995327 16 - TSS region transcription start site region 106972
Tssr106973 11 16995332 to 16995359 27 - TSS region transcription start site region 106973
Tssr106974 11 16999722 to 16999726 4 - TSS region transcription start site region 106974
Tssr106975 11 17000388 to 17000400 12 - TSS region transcription start site region 106975
Tssr106976 11 17002928 to 17002951 23 - TSS region transcription start site region 106976
Tssr106977 11 17008647 to 17008687 40 - TSS region transcription start site region 106977
Gm12014 11 17017867 to 17020209 2342 + pseudogene predicted gene 12014
Tssr106978 11 17044334 to 17044337 3 - TSS region transcription start site region 106978
Tssr100443 11 17051601 to 17051625 24 + TSS region transcription start site region 100443
Tssr100444 11 17051626 to 17051651 25 + TSS region transcription start site region 100444
Tssr100445 11 17051654 to 17051674 20 + TSS region transcription start site region 100445
Cpgi2594 11 17051759 to 17052385 626 CpG island CpG island 2594
Tssr100446 11 17051792 to 17051808 16 + TSS region transcription start site region 100446
Tssr100447 11 17051823 to 17051899 76 + TSS region transcription start site region 100447
Tssr100448 11 17051926 to 17051974 48 + TSS region transcription start site region 100448
Cnrip1 11 17051934 to 17079372 27438 + protein coding gene cannabinoid receptor interacting protein 1
Tssr100449 11 17051976 to 17051996 20 + TSS region transcription start site region 100449
Tssr100450 11 17052144 to 17052151 7 + TSS region transcription start site region 100450
Tssr106979 11 17052344 to 17052363 19 - TSS region transcription start site region 106979
Tssr100451 11 17054690 to 17054697 7 + TSS region transcription start site region 100451
Gm12013 11 17095490 to 17095644 154 - pseudogene predicted gene 12013
Tssr106980 11 17095692 to 17095703 11 - TSS region transcription start site region 106980
D11Mit63 11 17106175 to 17106313 138 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 63
Orgwq8 11 17106175 to 67187585 50081410 QTL organ weight QTL 8
Cpgi2595 11 17158797 to 17160177 1380 CpG island CpG island 2595
Tssr100452 11 17159274 to 17159357 83 + TSS region transcription start site region 100452
Ppp3r1 11 17159298 to 17200380 41082 + protein coding gene protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)
Tssr100453 11 17159409 to 17159427 18 + TSS region transcription start site region 100453
Tssr100454 11 17159436 to 17159456 20 + TSS region transcription start site region 100454