MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:16535438-16755538

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr106940	11	16591511 to 16591530	19	-	TSS region	transcription start site region 106940
Tssr106941	11	16591668 to 16591674	6	-	TSS region	transcription start site region 106941
Tssr106942	11	16592894 to 16592897	3	-	TSS region	transcription start site region 106942
Gm12663	11	16635109 to 16636066	957	-	pseudogene	predicted gene 12663
Tssr106943	11	16636128 to 16636141	13	-	TSS region	transcription start site region 106943
Gm12664	11	16643009 to 16643921	912	-	pseudogene	predicted gene 12664
Gm24714	11	16645438 to 16645538	100	-	miRNA gene	predicted gene, 24714
D11Mit75	11	16648403 to 16648528	125		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 75
Gm39583	11	16687946 to 16742258	54312	-	lncRNA gene	predicted gene, 39583
Gm25698	11	16732605 to 16732711	106	-	snRNA gene	predicted gene, 25698
Tssr106944	11	16742244 to 16742280	36	-	TSS region	transcription start site region 106944
Cpgi2592	11	16751955 to 16753433	1478		CpG island	CpG island 2592
Tssr3432	11	16752197 to 16752202	5	+	TSS region	transcription start site region 3432
Egfr	11	16752203 to 16913907	161704	+	protein coding gene	epidermal growth factor receptor
Tssr100407	11	16752203 to 16752215	12	+	TSS region	transcription start site region 100407
Tssr100408	11	16752220 to 16752236	16	+	TSS region	transcription start site region 100408
Tssr100409	11	16752245 to 16752265	20	+	TSS region	transcription start site region 100409
Tssr100410	11	16753320 to 16753333	13	+	TSS region	transcription start site region 100410