MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:16281638-16728484

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Vstm2a	11	16257357 to 16284551	27194	+	protein coding gene	V-set and transmembrane domain containing 2A
Gm12012	11	16439254 to 16440319	1065	+	pseudogene	predicted gene 12012
Sec61g	11	16501638 to 16508484	6846	-	protein coding gene	SEC61, gamma subunit
Cpgi2591	11	16507759 to 16508568	809		CpG island	CpG island 2591
Tssr106937	11	16508098 to 16508139	41	-	TSS region	transcription start site region 106937
Tssr106938	11	16508149 to 16508187	38	-	TSS region	transcription start site region 106938
Tssr106939	11	16508487 to 16508507	20	-	TSS region	transcription start site region 106939
Akt2-ps	11	16514533 to 16515981	1448	+	pseudogene	thymoma viral proto-oncogene 2, pseudogene
Tssr100406	11	16526107 to 16526113	6	+	TSS region	transcription start site region 100406
Tssr106940	11	16591511 to 16591530	19	-	TSS region	transcription start site region 106940
Tssr106941	11	16591668 to 16591674	6	-	TSS region	transcription start site region 106941
Tssr106942	11	16592894 to 16592897	3	-	TSS region	transcription start site region 106942
Gm12663	11	16635109 to 16636066	957	-	pseudogene	predicted gene 12663
Tssr106943	11	16636128 to 16636141	13	-	TSS region	transcription start site region 106943
Gm12664	11	16643009 to 16643921	912	-	pseudogene	predicted gene 12664
Gm24714	11	16645438 to 16645538	100	-	miRNA gene	predicted gene, 24714
D11Mit75	11	16648403 to 16648528	125		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 75
Gm39583	11	16687946 to 16742258	54312	-	lncRNA gene	predicted gene, 39583