Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:12199850-12729879

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cobl 11 12236676 to 12464960 228284 - protein coding gene cordon-bleu WH2 repeat
Gm39581 11 12242309 to 12263293 20984 + lncRNA gene predicted gene, 39581
Tssr106921 11 12309732 to 12309746 14 - TSS region transcription start site region 106921
Tssr106922 11 12309760 to 12309771 11 - TSS region transcription start site region 106922
Gm12002 11 12313365 to 12346088 32723 + antisense lncRNA gene predicted gene 12002
Tssr100396 11 12314509 to 12314529 20 + TSS region transcription start site region 100396
Eae44 11 12318637 to 40060013 27741376 QTL experimental allergic encephalomyelitis susceptibility 44
Scfq3 11 12318637 to 68609504 56290867 QTL subcutaneous fat pad weight QTL 3
W3q4 11 12318637 to 68609504 56290867 QTL weight 3 weeks QTL 4
D11Mit2 11 12318637 to 12318743 106 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 2
Egq4 11 12318637 to 68609504 56290867 QTL early growth QTL 4
Epfq4 11 12318637 to 68609504 56290867 QTL epididymal fat pad weight QTL 4
Lgaq1 11 12318637 to 68609504 56290867 QTL late growth adjusted QTL 1
Lgq1 11 12318637 to 68609504 56290867 QTL late growth QTL 1
Lmrq4 11 12318637 to 69794121 57475484 QTL Leishmania major resistance QTL 4
Orq2 11 12318637 to 68609504 56290867 QTL ovulation rate QTL 2
W10q2 11 12318637 to 68609504 56290867 QTL weight 10 weeks QTL 2
Kidpq1 11 12318637 to 68609504 56290867 QTL kidney weight percentage QTL 1
Tailq1 11 12318637 to 68609504 56290867 QTL tail length QTL 1
W6q3 11 12318637 to 68609504 56290867 QTL weight 6 weeks QTL 3
Tssr106923 11 12354027 to 12354032 5 - TSS region transcription start site region 106923
Gm30596 11 12379434 to 12388976 9542 + lncRNA gene predicted gene, 30596
Tssr106924 11 12412136 to 12412153 17 - TSS region transcription start site region 106924
Tssr106925 11 12428969 to 12428991 22 - TSS region transcription start site region 106925
Tssr106926 11 12429015 to 12429028 13 - TSS region transcription start site region 106926
Cpgi2588 11 12464272 to 12465562 1290 CpG island CpG island 2588
Tssr106927 11 12464746 to 12464759 13 - TSS region transcription start site region 106927
Tssr106928 11 12464819 to 12464845 26 - TSS region transcription start site region 106928
Tssr106929 11 12464850 to 12464879 29 - TSS region transcription start site region 106929
Tssr106930 11 12464881 to 12464997 116 - TSS region transcription start site region 106930
Gm19314 11 12557219 to 12557644 425 - pseudogene predicted gene, 19314
Tssr106931 11 12557809 to 12557822 13 - TSS region transcription start site region 106931
D11Mit204 11 12610927 to 12611067 140 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 204
Gm22156 11 12676933 to 12677073 140 + snoRNA gene predicted gene, 22156
D11Mit150 11 12692718 to 12692908 190 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 150
Gm22789 11 12692813 to 12692942 129 + snoRNA gene predicted gene, 22789
Lvrq7 11 118131898 to 12318637 -105813261 QTL liver weight QTL 7