Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:121578107-122035319

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tbcd 11 121451949 to 121617164 165215 + protein coding gene tubulin-specific chaperone d
Tssr106413 11 121592564 to 121592572 8 + TSS region transcription start site region 106413
Tssr106414 11 121592593 to 121592613 20 + TSS region transcription start site region 106414
Tssr106415 11 121601693 to 121601710 17 + TSS region transcription start site region 106415
B3gntl1 11 121616197 to 121673153 56956 - protein coding gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1
Gm18479 11 121663779 to 121664585 806 + pseudogene predicted gene, 18479
Cpgi4348 11 121672660 to 121673593 933 CpG island CpG island 4348
Tssr112465 11 121673069 to 121673102 33 - TSS region transcription start site region 112465
Tssr112466 11 121673103 to 121673146 43 - TSS region transcription start site region 112466
Tssr106416 11 121673448 to 121673464 16 + TSS region transcription start site region 106416
Metrnl 11 121701544 to 121716306 14762 + protein coding gene meteorin, glial cell differentiation regulator-like
Cpgi4349 11 121702045 to 121703752 1707 CpG island CpG island 4349
Tssr106417 11 121702393 to 121702404 11 + TSS region transcription start site region 106417
Tssr106418 11 121702418 to 121702434 16 + TSS region transcription start site region 106418
Tssr106419 11 121702453 to 121702467 14 + TSS region transcription start site region 106419
Tssr106420 11 121702528 to 121702539 11 + TSS region transcription start site region 106420
Tssr106421 11 121702575 to 121702586 11 + TSS region transcription start site region 106421
Tssr106422 11 121702591 to 121702616 25 + TSS region transcription start site region 106422
Tssr106423 11 121702756 to 121702766 10 + TSS region transcription start site region 106423
Tssr112467 11 121703303 to 121703311 8 - TSS region transcription start site region 112467
Tssr106424 11 121706594 to 121706604 10 + TSS region transcription start site region 106424
Tssr106425 11 121708680 to 121708682 2 + TSS region transcription start site region 106425
Tssr106426 11 121717095 to 121717132 37 + TSS region transcription start site region 106426
Tssr106427 11 121717176 to 121717184 8 + TSS region transcription start site region 106427
Tssr106428 11 121717314 to 121717330 16 + TSS region transcription start site region 106428
Tssr106429 11 121718508 to 121718526 18 + TSS region transcription start site region 106429
Tssr106430 11 121718537 to 121718560 23 + TSS region transcription start site region 106430
Tssr106431 11 121718576 to 121718601 25 + TSS region transcription start site region 106431
Tssr112468 11 121741578 to 121741602 24 - TSS region transcription start site region 112468
Tssr112469 11 121744067 to 121744092 25 - TSS region transcription start site region 112469
Tssr112470 11 121745656 to 121745685 29 - TSS region transcription start site region 112470
Tssr106432 11 121748543 to 121748552 9 + TSS region transcription start site region 106432
Gm30338 11 121794930 to 121797346 2416 + lncRNA gene predicted gene, 30338
Gm12589 11 121803107 to 121810319 7212 + lincRNA gene predicted gene 12589
Tssr106433 11 121805486 to 121805490 4 + TSS region transcription start site region 106433
Gm29513 11 121817408 to 121817609 201 + lincRNA gene predicted gene 29513
Gm15643 11 121829446 to 121830103 657 - antisense lncRNA gene predicted gene 15643
Cpgi4350 11 121830078 to 121831069 991 CpG island CpG island 4350
Tssr112471 11 121830141 to 121830150 9 - TSS region transcription start site region 112471
Tssr106434 11 121830193 to 121830198 5 + TSS region transcription start site region 106434
Tssr106435 11 121830215 to 121830224 9 + TSS region transcription start site region 106435
Tssr106436 11 121830231 to 121830250 19 + TSS region transcription start site region 106436
Ptchd3 11 121830247 to 121843423 13176 + protein coding gene patched domain containing 3
Tssr106437 11 121830254 to 121830279 25 + TSS region transcription start site region 106437
Tssr106438 11 121847034 to 121847038 4 + TSS region transcription start site region 106438
Gm12586 11 121856704 to 121858792 2088 + pseudogene predicted gene 12586
D11Mit1007 11 121870088 to 121870246 158 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 1007
Gm12590 11 121882333 to 121883863 1530 - lincRNA gene predicted gene 12590
Gm12587 11 121886542 to 121886968 426 - pseudogene predicted gene 12587
Gm9631 11 121905745 to 121925328 19583 - protein coding gene predicted gene 9631
Cpgi4351 11 121925120 to 121925304 184 CpG island CpG island 4351
Tssr112472 11 121925314 to 121925343 29 - TSS region transcription start site region 112472
Gm12588 11 121943386 to 121956762 13376 - protein coding gene predicted gene 12588
Tssr112473 11 121956720 to 121956733 13 - TSS region transcription start site region 112473
n-TMcat1 11 121964062 to 121964134 72 - tRNA gene nuclear encoded tRNA methionine 1 (anticodon CAT)
Gm12591 11 121968211 to 121970685 2474 - pseudogene predicted gene 12591