Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:120946238-121046346

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rvfs2 11 100363360 to 120996339 20632979 QTL Rift Valley fever susceptibility 2
Cpgi4333 11 120948484 to 120949699 1215 CpG island CpG island 4333
Slc16a3 11 120948484 to 120959000 10516 + protein coding gene solute carrier family 16 (monocarboxylic acid transporters), member 3
Tssr106378 11 120948493 to 120948533 40 + TSS region transcription start site region 106378
Tssr106379 11 120948543 to 120948553 10 + TSS region transcription start site region 106379
Tssr106380 11 120948714 to 120948746 32 + TSS region transcription start site region 106380
Tssr106381 11 120949100 to 120949114 14 + TSS region transcription start site region 106381
Tssr106382 11 120949516 to 120949519 3 + TSS region transcription start site region 106382
Cpgi4334 11 120950667 to 120951180 513 CpG island CpG island 4334
Tssr106383 11 120955324 to 120955360 36 + TSS region transcription start site region 106383
Tssr106384 11 120956535 to 120956547 12 + TSS region transcription start site region 106384
Tssr106385 11 120958010 to 120958017 7 + TSS region transcription start site region 106385
Tssr106386 11 120958217 to 120958236 19 + TSS region transcription start site region 106386
Tssr106387 11 120958392 to 120958426 34 + TSS region transcription start site region 106387
Csnk1d 11 120961749 to 120991330 29581 - protein coding gene casein kinase 1, delta
Gm28192 11 120963844 to 120964764 920 + antisense lncRNA gene predicted gene 28192
Cpgi4335 11 120990141 to 120991777 1636 CpG island CpG island 4335
Tssr106388 11 120990558 to 120990575 17 + TSS region transcription start site region 106388
Tssr112430 11 120991020 to 120991037 17 - TSS region transcription start site region 112430
Tssr112431 11 120991039 to 120991074 35 - TSS region transcription start site region 112431
Tssr112432 11 120991078 to 120991095 17 - TSS region transcription start site region 112432
Tssr112433 11 120991103 to 120991106 3 - TSS region transcription start site region 112433
Tssr112434 11 120991260 to 120991278 18 - TSS region transcription start site region 112434
Tssr112435 11 120991305 to 120991339 34 - TSS region transcription start site region 112435
Tssr106389 11 120991382 to 120991395 13 + TSS region transcription start site region 106389
Tssr106390 11 120991412 to 120991439 27 + TSS region transcription start site region 106390
Gm30062 11 120991438 to 121015421 23983 + lncRNA gene predicted gene, 30062
D11Mit69.2 11 120996133 to 120996262 129 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 69.2
D11Mit69 11 120996173 to 120996339 166 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 69
D11Dcr31 11 120996238 to 120996346 108 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 31
Gm11774 11 121003492 to 121003784 292 - pseudogene predicted gene 11774
Cpgi4336 11 121014858 to 121015084 226 CpG island CpG island 4336
Gm22152 11 121030858 to 121030982 124 + snoRNA gene predicted gene, 22152
Cd7 11 121036747 to 121039418 2671 - protein coding gene CD7 antigen
Gm11775 11 121037695 to 121053417 15722 + antisense lncRNA gene predicted gene 11775
Tssr112436 11 121038306 to 121038311 5 - TSS region transcription start site region 112436
Tssr112437 11 121039381 to 121039392 11 - TSS region transcription start site region 112437
Tssr112438 11 121039400 to 121039463 63 - TSS region transcription start site region 112438