Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:120739156-120879176

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr112397 11 120748000 to 120748003 3 - TSS region transcription start site region 112397
Tssr106363 11 120762792 to 120762793 1 + TSS region transcription start site region 106363
Hmga1b 11 120762794 to 120764392 1598 + protein coding gene high mobility group AT-hook 1B
Tssr106364 11 120762818 to 120762829 11 + TSS region transcription start site region 106364
Tssr106365 11 120762987 to 120763018 31 + TSS region transcription start site region 106365
Tssr106366 11 120763084 to 120763106 22 + TSS region transcription start site region 106366
Tssr106367 11 120763129 to 120763145 16 + TSS region transcription start site region 106367
Tssr106368 11 120765284 to 120765300 16 + TSS region transcription start site region 106368
Gm11771 11 120765311 to 120767366 2055 + pseudogene predicted gene 11771
Tssr106369 11 120766249 to 120766266 17 + TSS region transcription start site region 106369
Tssr106370 11 120767043 to 120767081 38 + TSS region transcription start site region 106370
Tssr106371 11 120767096 to 120767109 13 + TSS region transcription start site region 106371
Tssr106372 11 120767321 to 120767351 30 + TSS region transcription start site region 106372
Rfng 11 120780746 to 120784207 3461 - protein coding gene RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
Tssr112398 11 120781826 to 120781841 15 - TSS region transcription start site region 112398
Cpgi4329 11 120783264 to 120785274 2010 CpG island CpG island 4329
Tssr112399 11 120784166 to 120784176 10 - TSS region transcription start site region 112399
Tssr112400 11 120784183 to 120784209 26 - TSS region transcription start site region 112400
Tssr112401 11 120784210 to 120784230 20 - TSS region transcription start site region 112401
Tssr112402 11 120784252 to 120784261 9 - TSS region transcription start site region 112402
Tssr106373 11 120784257 to 120784272 15 + TSS region transcription start site region 106373
Gps1 11 120784272 to 120789102 4830 + protein coding gene G protein pathway suppressor 1
Tssr106374 11 120784308 to 120784345 37 + TSS region transcription start site region 106374
Tssr106375 11 120784441 to 120784453 12 + TSS region transcription start site region 106375
Tssr106376 11 120784498 to 120784570 72 + TSS region transcription start site region 106376
Dus1l 11 120789201 to 120796403 7202 - protein coding gene dihydrouridine synthase 1-like (S. cerevisiae)
Cpgi4330 11 120795693 to 120796659 966 CpG island CpG island 4330
Tssr112403 11 120796369 to 120796405 36 - TSS region transcription start site region 112403
Fasn 11 120805958 to 120824547 18589 - protein coding gene fatty acid synthase
Tssr112404 11 120807856 to 120807859 3 - TSS region transcription start site region 112404
Tssr112405 11 120809156 to 120809176 20 - TSS region transcription start site region 112405
Tssr112406 11 120816209 to 120816233 24 - TSS region transcription start site region 112406
Tssr112407 11 120816404 to 120816424 20 - TSS region transcription start site region 112407
Tssr112408 11 120817149 to 120817163 14 - TSS region transcription start site region 112408
Tssr112409 11 120817178 to 120817193 15 - TSS region transcription start site region 112409
Tssr112410 11 120818585 to 120818597 12 - TSS region transcription start site region 112410
Tssr112411 11 120819161 to 120819182 21 - TSS region transcription start site region 112411
Tssr112412 11 120820291 to 120820310 19 - TSS region transcription start site region 112412
Tssr112413 11 120820616 to 120820636 20 - TSS region transcription start site region 112413
Tssr112414 11 120821130 to 120821138 8 - TSS region transcription start site region 112414
Tssr112415 11 120821198 to 120821209 11 - TSS region transcription start site region 112415
Cpgi4331 11 120823246 to 120825066 1820 CpG island CpG island 4331
Tssr112416 11 120824098 to 120824116 18 - TSS region transcription start site region 112416
Tssr112417 11 120824524 to 120824576 52 - TSS region transcription start site region 112417
Tssr112418 11 120825155 to 120825183 28 - TSS region transcription start site region 112418
Ccdc57 11 120826529 to 120932872 106343 - protein coding gene coiled-coil domain containing 57
Gm11773 11 120831029 to 120834244 3215 + antisense lncRNA gene predicted gene 11773
Tssr112419 11 120852674 to 120852700 26 - TSS region transcription start site region 112419
Tssr112420 11 120856232 to 120856251 19 - TSS region transcription start site region 112420
Tssr112421 11 120866601 to 120866604 3 - TSS region transcription start site region 112421
Tssr112422 11 120866605 to 120866617 12 - TSS region transcription start site region 112422
Tssr112423 11 120866619 to 120866639 20 - TSS region transcription start site region 112423
Tssr112424 11 120866641 to 120866674 33 - TSS region transcription start site region 112424