Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:120661543-120781564

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88 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Notumos 11 120659157 to 120661815 2658 + antisense lncRNA gene notum palmitoleoyl-protein carboxylesterase, opposite strand
Cpgi4323 11 120659667 to 120661606 1939 CpG island CpG island 4323
Cpgi4324 11 120672685 to 120673598 913 CpG island CpG island 4324
Tssr106333 11 120672967 to 120672978 11 + TSS region transcription start site region 106333
Aspscr1 11 120672973 to 120709447 36474 + protein coding gene alveolar soft part sarcoma chromosome region, candidate 1 (human)
Tssr106334 11 120672998 to 120673009 11 + TSS region transcription start site region 106334
Tssr106335 11 120673018 to 120673066 48 + TSS region transcription start site region 106335
Tssr112367 11 120673195 to 120673210 15 - TSS region transcription start site region 112367
Tssr106336 11 120673369 to 120673393 24 + TSS region transcription start site region 106336
Tssr106337 11 120673697 to 120673716 19 + TSS region transcription start site region 106337
Tssr106338 11 120677325 to 120677355 30 + TSS region transcription start site region 106338
Gm17178 11 120689146 to 120709447 20301 - antisense lncRNA gene predicted gene 17178
Tssr106339 11 120703987 to 120704002 15 + TSS region transcription start site region 106339
Tssr106340 11 120708072 to 120708090 18 + TSS region transcription start site region 106340
Tssr106341 11 120708101 to 120708117 16 + TSS region transcription start site region 106341
Cenpx 11 120710942 to 120713738 2796 - protein coding gene centromere protein X
Tssr112368 11 120711113 to 120711163 50 - TSS region transcription start site region 112368
Cpgi4325 11 120712627 to 120714503 1876 CpG island CpG island 4325
Tssr112369 11 120713725 to 120713748 23 - TSS region transcription start site region 112369
Tssr106342 11 120713919 to 120713965 46 + TSS region transcription start site region 106342
Lrrc45 11 120713943 to 120721128 7185 + protein coding gene leucine rich repeat containing 45
Tssr106343 11 120713978 to 120713999 21 + TSS region transcription start site region 106343
Cpgi4326 11 120720548 to 120722510 1962 CpG island CpG island 4326
Tssr106344 11 120721452 to 120721536 84 + TSS region transcription start site region 106344
Rac3 11 120721470 to 120723969 2499 + protein coding gene Rac family small GTPase 3
Tssr106345 11 120721543 to 120721564 21 + TSS region transcription start site region 106345
Tssr106346 11 120721981 to 120722031 50 + TSS region transcription start site region 106346
Tssr106347 11 120722041 to 120722071 30 + TSS region transcription start site region 106347
Tssr106348 11 120722209 to 120722220 11 + TSS region transcription start site region 106348
Tssr106349 11 120722244 to 120722265 21 + TSS region transcription start site region 106349
Dcxr 11 120725399 to 120727281 1882 - protein coding gene dicarbonyl L-xylulose reductase
Tssr112370 11 120726659 to 120726667 8 - TSS region transcription start site region 112370
Cpgi4327 11 120726821 to 120727374 553 CpG island CpG island 4327
Tssr112371 11 120727226 to 120727292 66 - TSS region transcription start site region 112371
Tssr112372 11 120727293 to 120727306 13 - TSS region transcription start site region 112372
Tssr112373 11 120727314 to 120727321 7 - TSS region transcription start site region 112373
Cbr2 11 120729485 to 120732025 2540 - protein coding gene carbonyl reductase 2
Tssr106350 11 120729486 to 120729497 11 + TSS region transcription start site region 106350
Cpgi4328 11 120729496 to 120729816 320 CpG island CpG island 4328
Tssr112374 11 120729520 to 120729529 9 - TSS region transcription start site region 112374
Tssr106351 11 120729537 to 120729548 11 + TSS region transcription start site region 106351
Tssr106352 11 120729558 to 120729638 80 + TSS region transcription start site region 106352
Tssr112375 11 120729570 to 120729581 11 - TSS region transcription start site region 112375
Tssr112376 11 120729595 to 120729623 28 - TSS region transcription start site region 112376
Tssr112377 11 120729633 to 120729640 7 - TSS region transcription start site region 112377
Tssr112378 11 120729641 to 120729663 22 - TSS region transcription start site region 112378
Tssr112379 11 120729665 to 120729671 6 - TSS region transcription start site region 112379
Tssr106353 11 120729666 to 120729688 22 + TSS region transcription start site region 106353
Tssr112380 11 120729674 to 120729696 22 - TSS region transcription start site region 112380
Tssr112381 11 120729719 to 120729730 11 - TSS region transcription start site region 112381
Tssr112382 11 120729732 to 120729750 18 - TSS region transcription start site region 112382
Tssr112383 11 120729814 to 120729822 8 - TSS region transcription start site region 112383
Tssr106354 11 120730253 to 120730260 7 + TSS region transcription start site region 106354
Tssr106355 11 120730261 to 120730296 35 + TSS region transcription start site region 106355
Tssr112384 11 120730304 to 120730312 8 - TSS region transcription start site region 112384
Tssr106356 11 120730417 to 120730453 36 + TSS region transcription start site region 106356
Tssr112385 11 120730451 to 120730465 14 - TSS region transcription start site region 112385
Tssr112386 11 120730476 to 120730487 11 - TSS region transcription start site region 112386
Tssr106357 11 120730494 to 120730507 13 + TSS region transcription start site region 106357
Tssr112387 11 120730502 to 120730515 13 - TSS region transcription start site region 112387
Tssr106358 11 120730614 to 120730641 27 + TSS region transcription start site region 106358
Tssr112388 11 120730640 to 120730676 36 - TSS region transcription start site region 112388
Tssr106359 11 120730742 to 120730755 13 + TSS region transcription start site region 106359
Tssr106360 11 120730768 to 120730815 47 + TSS region transcription start site region 106360
Tssr106361 11 120730823 to 120730866 43 + TSS region transcription start site region 106361
Tssr112389 11 120730827 to 120730845 18 - TSS region transcription start site region 112389
Tssr112390 11 120730851 to 120730867 16 - TSS region transcription start site region 112390
Tssr106362 11 120730868 to 120730877 9 + TSS region transcription start site region 106362
Tssr112391 11 120730877 to 120730887 10 - TSS region transcription start site region 112391
Tssr112392 11 120730892 to 120730904 12 - TSS region transcription start site region 112392
Tssr112393 11 120731042 to 120731053 11 - TSS region transcription start site region 112393
Tssr112394 11 120731086 to 120731107 21 - TSS region transcription start site region 112394
Tssr112395 11 120731893 to 120731903 10 - TSS region transcription start site region 112395
Tssr112396 11 120731983 to 120731998 15 - TSS region transcription start site region 112396
Tssr112397 11 120748000 to 120748003 3 - TSS region transcription start site region 112397
Tssr106363 11 120762792 to 120762793 1 + TSS region transcription start site region 106363
Hmga1b 11 120762794 to 120764392 1598 + protein coding gene high mobility group AT-hook 1B
Tssr106364 11 120762818 to 120762829 11 + TSS region transcription start site region 106364
Tssr106365 11 120762987 to 120763018 31 + TSS region transcription start site region 106365
Tssr106366 11 120763084 to 120763106 22 + TSS region transcription start site region 106366
Tssr106367 11 120763129 to 120763145 16 + TSS region transcription start site region 106367
Tssr106368 11 120765284 to 120765300 16 + TSS region transcription start site region 106368
Gm11771 11 120765311 to 120767366 2055 + pseudogene predicted gene 11771
Tssr106369 11 120766249 to 120766266 17 + TSS region transcription start site region 106369
Tssr106370 11 120767043 to 120767081 38 + TSS region transcription start site region 106370
Tssr106371 11 120767096 to 120767109 13 + TSS region transcription start site region 106371
Tssr106372 11 120767321 to 120767351 30 + TSS region transcription start site region 106372
Rfng 11 120780746 to 120784207 3461 - protein coding gene RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase