Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:120661113-120761163

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Notum 11 120653788 to 120661175 7387 - protein coding gene notum palmitoleoyl-protein carboxylesterase
Notumos 11 120659157 to 120661815 2658 + antisense lncRNA gene notum palmitoleoyl-protein carboxylesterase, opposite strand
Cpgi4323 11 120659667 to 120661606 1939 CpG island CpG island 4323
Tssr112366 11 120661184 to 120661199 15 - TSS region transcription start site region 112366
Cpgi4324 11 120672685 to 120673598 913 CpG island CpG island 4324
Tssr106333 11 120672967 to 120672978 11 + TSS region transcription start site region 106333
Aspscr1 11 120672973 to 120709447 36474 + protein coding gene alveolar soft part sarcoma chromosome region, candidate 1 (human)
Tssr106334 11 120672998 to 120673009 11 + TSS region transcription start site region 106334
Tssr106335 11 120673018 to 120673066 48 + TSS region transcription start site region 106335
Tssr112367 11 120673195 to 120673210 15 - TSS region transcription start site region 112367
Tssr106336 11 120673369 to 120673393 24 + TSS region transcription start site region 106336
Tssr106337 11 120673697 to 120673716 19 + TSS region transcription start site region 106337
Tssr106338 11 120677325 to 120677355 30 + TSS region transcription start site region 106338
Gm17178 11 120689146 to 120709447 20301 - antisense lncRNA gene predicted gene 17178
Tssr106339 11 120703987 to 120704002 15 + TSS region transcription start site region 106339
Tssr106340 11 120708072 to 120708090 18 + TSS region transcription start site region 106340
Tssr106341 11 120708101 to 120708117 16 + TSS region transcription start site region 106341
Cenpx 11 120710942 to 120713738 2796 - protein coding gene centromere protein X
Tssr112368 11 120711113 to 120711163 50 - TSS region transcription start site region 112368
Cpgi4325 11 120712627 to 120714503 1876 CpG island CpG island 4325
Tssr112369 11 120713725 to 120713748 23 - TSS region transcription start site region 112369
Tssr106342 11 120713919 to 120713965 46 + TSS region transcription start site region 106342
Lrrc45 11 120713943 to 120721128 7185 + protein coding gene leucine rich repeat containing 45
Tssr106343 11 120713978 to 120713999 21 + TSS region transcription start site region 106343
Cpgi4326 11 120720548 to 120722510 1962 CpG island CpG island 4326
Tssr106344 11 120721452 to 120721536 84 + TSS region transcription start site region 106344
Rac3 11 120721470 to 120723969 2499 + protein coding gene Rac family small GTPase 3
Tssr106345 11 120721543 to 120721564 21 + TSS region transcription start site region 106345
Tssr106346 11 120721981 to 120722031 50 + TSS region transcription start site region 106346
Tssr106347 11 120722041 to 120722071 30 + TSS region transcription start site region 106347
Tssr106348 11 120722209 to 120722220 11 + TSS region transcription start site region 106348
Tssr106349 11 120722244 to 120722265 21 + TSS region transcription start site region 106349
Dcxr 11 120725399 to 120727281 1882 - protein coding gene dicarbonyl L-xylulose reductase
Tssr112370 11 120726659 to 120726667 8 - TSS region transcription start site region 112370
Cpgi4327 11 120726821 to 120727374 553 CpG island CpG island 4327
Tssr112371 11 120727226 to 120727292 66 - TSS region transcription start site region 112371
Tssr112372 11 120727293 to 120727306 13 - TSS region transcription start site region 112372
Tssr112373 11 120727314 to 120727321 7 - TSS region transcription start site region 112373
Cbr2 11 120729485 to 120732025 2540 - protein coding gene carbonyl reductase 2
Tssr106350 11 120729486 to 120729497 11 + TSS region transcription start site region 106350
Cpgi4328 11 120729496 to 120729816 320 CpG island CpG island 4328
Tssr112374 11 120729520 to 120729529 9 - TSS region transcription start site region 112374
Tssr106351 11 120729537 to 120729548 11 + TSS region transcription start site region 106351
Tssr106352 11 120729558 to 120729638 80 + TSS region transcription start site region 106352
Tssr112375 11 120729570 to 120729581 11 - TSS region transcription start site region 112375
Tssr112376 11 120729595 to 120729623 28 - TSS region transcription start site region 112376
Tssr112377 11 120729633 to 120729640 7 - TSS region transcription start site region 112377
Tssr112378 11 120729641 to 120729663 22 - TSS region transcription start site region 112378
Tssr112379 11 120729665 to 120729671 6 - TSS region transcription start site region 112379
Tssr106353 11 120729666 to 120729688 22 + TSS region transcription start site region 106353
Tssr112380 11 120729674 to 120729696 22 - TSS region transcription start site region 112380
Tssr112381 11 120729719 to 120729730 11 - TSS region transcription start site region 112381
Tssr112382 11 120729732 to 120729750 18 - TSS region transcription start site region 112382
Tssr112383 11 120729814 to 120729822 8 - TSS region transcription start site region 112383
Tssr106354 11 120730253 to 120730260 7 + TSS region transcription start site region 106354
Tssr106355 11 120730261 to 120730296 35 + TSS region transcription start site region 106355
Tssr112384 11 120730304 to 120730312 8 - TSS region transcription start site region 112384
Tssr106356 11 120730417 to 120730453 36 + TSS region transcription start site region 106356
Tssr112385 11 120730451 to 120730465 14 - TSS region transcription start site region 112385
Tssr112386 11 120730476 to 120730487 11 - TSS region transcription start site region 112386
Tssr106357 11 120730494 to 120730507 13 + TSS region transcription start site region 106357
Tssr112387 11 120730502 to 120730515 13 - TSS region transcription start site region 112387
Tssr106358 11 120730614 to 120730641 27 + TSS region transcription start site region 106358
Tssr112388 11 120730640 to 120730676 36 - TSS region transcription start site region 112388
Tssr106359 11 120730742 to 120730755 13 + TSS region transcription start site region 106359
Tssr106360 11 120730768 to 120730815 47 + TSS region transcription start site region 106360
Tssr106361 11 120730823 to 120730866 43 + TSS region transcription start site region 106361
Tssr112389 11 120730827 to 120730845 18 - TSS region transcription start site region 112389
Tssr112390 11 120730851 to 120730867 16 - TSS region transcription start site region 112390
Tssr106362 11 120730868 to 120730877 9 + TSS region transcription start site region 106362
Tssr112391 11 120730877 to 120730887 10 - TSS region transcription start site region 112391
Tssr112392 11 120730892 to 120730904 12 - TSS region transcription start site region 112392
Tssr112393 11 120731042 to 120731053 11 - TSS region transcription start site region 112393
Tssr112394 11 120731086 to 120731107 21 - TSS region transcription start site region 112394
Tssr112395 11 120731893 to 120731903 10 - TSS region transcription start site region 112395
Tssr112396 11 120731983 to 120731998 15 - TSS region transcription start site region 112396
Tssr112397 11 120748000 to 120748003 3 - TSS region transcription start site region 112397