Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:120627325-120727355

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mafg 11 120625117 to 120633547 8430 - protein coding gene v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)
Tssr112351 11 120628079 to 120628103 24 - TSS region transcription start site region 112351
Cpgi4318 11 120629397 to 120629775 378 CpG island CpG island 4318
Tssr106329 11 120629584 to 120629603 19 + TSS region transcription start site region 106329
Tssr112352 11 120630097 to 120630123 26 - TSS region transcription start site region 112352
Tssr112353 11 120630126 to 120630160 34 - TSS region transcription start site region 112353
Tssr112354 11 120630516 to 120630537 21 - TSS region transcription start site region 112354
Tssr112355 11 120630556 to 120630588 32 - TSS region transcription start site region 112355
Cpgi4319 11 120632495 to 120634281 1786 CpG island CpG island 4319
Tssr106330 11 120632681 to 120632714 33 + TSS region transcription start site region 106330
Tssr106331 11 120633183 to 120633194 11 + TSS region transcription start site region 106331
Tssr112356 11 120633355 to 120633374 19 - TSS region transcription start site region 112356
Tssr112357 11 120633539 to 120633591 52 - TSS region transcription start site region 112357
Tssr112358 11 120633594 to 120633605 11 - TSS region transcription start site region 112358
Tssr112359 11 120633622 to 120633650 28 - TSS region transcription start site region 112359
Tssr112360 11 120633669 to 120633676 7 - TSS region transcription start site region 112360
Tssr106332 11 120633719 to 120633761 42 + TSS region transcription start site region 106332
Gm17586 11 120633768 to 120635125 1357 + lincRNA gene predicted gene, 17586
Pycr1 11 120635712 to 120643769 8057 - protein coding gene pyrroline-5-carboxylate reductase 1
Cpgi4320 11 120643191 to 120643925 734 CpG island CpG island 4320
Tssr112361 11 120643289 to 120643302 13 - TSS region transcription start site region 112361
Tssr112362 11 120643697 to 120643762 65 - TSS region transcription start site region 112362
Myadml2 11 120646031 to 120648158 2127 - protein coding gene myeloid-associated differentiation marker-like 2
Cpgi4321 11 120647265 to 120647964 699 CpG island CpG island 4321
Myadml2os 11 120647670 to 120657061 9391 + antisense lncRNA gene myeloid-associated differentiation marker-like 2, opposite strand
Tssr112363 11 120648104 to 120648137 33 - TSS region transcription start site region 112363
Notum 11 120653788 to 120661175 7387 - protein coding gene notum palmitoleoyl-protein carboxylesterase
Cpgi4322 11 120658991 to 120659308 317 CpG island CpG island 4322
Notumos 11 120659157 to 120661815 2658 + antisense lncRNA gene notum palmitoleoyl-protein carboxylesterase, opposite strand
Cpgi4323 11 120659667 to 120661606 1939 CpG island CpG island 4323
Tssr112364 11 120660531 to 120660557 26 - TSS region transcription start site region 112364
Tssr112365 11 120660565 to 120660587 22 - TSS region transcription start site region 112365
Tssr3759 11 120660600 to 120660612 12 - TSS region transcription start site region 3759
Tssr3760 11 120660668 to 120660684 16 - TSS region transcription start site region 3760
Tssr112366 11 120661184 to 120661199 15 - TSS region transcription start site region 112366
Cpgi4324 11 120672685 to 120673598 913 CpG island CpG island 4324
Tssr106333 11 120672967 to 120672978 11 + TSS region transcription start site region 106333
Aspscr1 11 120672973 to 120709447 36474 + protein coding gene alveolar soft part sarcoma chromosome region, candidate 1 (human)
Tssr106334 11 120672998 to 120673009 11 + TSS region transcription start site region 106334
Tssr106335 11 120673018 to 120673066 48 + TSS region transcription start site region 106335
Tssr112367 11 120673195 to 120673210 15 - TSS region transcription start site region 112367
Tssr106336 11 120673369 to 120673393 24 + TSS region transcription start site region 106336
Tssr106337 11 120673697 to 120673716 19 + TSS region transcription start site region 106337
Tssr106338 11 120677325 to 120677355 30 + TSS region transcription start site region 106338
Gm17178 11 120689146 to 120709447 20301 - antisense lncRNA gene predicted gene 17178
Tssr106339 11 120703987 to 120704002 15 + TSS region transcription start site region 106339
Tssr106340 11 120708072 to 120708090 18 + TSS region transcription start site region 106340
Tssr106341 11 120708101 to 120708117 16 + TSS region transcription start site region 106341
Cenpx 11 120710942 to 120713738 2796 - protein coding gene centromere protein X
Tssr112368 11 120711113 to 120711163 50 - TSS region transcription start site region 112368
Cpgi4325 11 120712627 to 120714503 1876 CpG island CpG island 4325
Tssr112369 11 120713725 to 120713748 23 - TSS region transcription start site region 112369
Tssr106342 11 120713919 to 120713965 46 + TSS region transcription start site region 106342
Lrrc45 11 120713943 to 120721128 7185 + protein coding gene leucine rich repeat containing 45
Tssr106343 11 120713978 to 120713999 21 + TSS region transcription start site region 106343
Cpgi4326 11 120720548 to 120722510 1962 CpG island CpG island 4326
Tssr106344 11 120721452 to 120721536 84 + TSS region transcription start site region 106344
Rac3 11 120721470 to 120723969 2499 + protein coding gene Rac family small GTPase 3
Tssr106345 11 120721543 to 120721564 21 + TSS region transcription start site region 106345
Tssr106346 11 120721981 to 120722031 50 + TSS region transcription start site region 106346
Tssr106347 11 120722041 to 120722071 30 + TSS region transcription start site region 106347
Tssr106348 11 120722209 to 120722220 11 + TSS region transcription start site region 106348
Tssr106349 11 120722244 to 120722265 21 + TSS region transcription start site region 106349
Dcxr 11 120725399 to 120727281 1882 - protein coding gene dicarbonyl L-xylulose reductase
Tssr112370 11 120726659 to 120726667 8 - TSS region transcription start site region 112370
Cpgi4327 11 120726821 to 120727374 553 CpG island CpG island 4327
Tssr112371 11 120727226 to 120727292 66 - TSS region transcription start site region 112371
Tssr112372 11 120727293 to 120727306 13 - TSS region transcription start site region 112372
Tssr112373 11 120727314 to 120727321 7 - TSS region transcription start site region 112373