Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:120605097-120655123

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Anapc11 11 120598421 to 120608198 9777 + protein coding gene anaphase promoting complex subunit 11
Tssr106325 11 120608300 to 120608307 7 + TSS region transcription start site region 106325
Cpgi4315 11 120608311 to 120608974 663 CpG island CpG island 4315
Tssr106326 11 120608469 to 120608487 18 + TSS region transcription start site region 106326
Npb 11 120608477 to 120609093 616 + protein coding gene neuropeptide B
Tssr106327 11 120608492 to 120608502 10 + TSS region transcription start site region 106327
Pcyt2 11 120610087 to 120617936 7849 - protein coding gene phosphate cytidylyltransferase 2, ethanolamine
Tssr106328 11 120617306 to 120617314 8 + TSS region transcription start site region 106328
Cpgi4316 11 120617331 to 120618266 935 CpG island CpG island 4316
Tssr112347 11 120617794 to 120617804 10 - TSS region transcription start site region 112347
Tssr112348 11 120617859 to 120617881 22 - TSS region transcription start site region 112348
Tssr112349 11 120617887 to 120617941 54 - TSS region transcription start site region 112349
Sirt7 11 120618372 to 120625008 6636 - protein coding gene sirtuin 7
Cpgi4317 11 120624399 to 120625453 1054 CpG island CpG island 4317
Mir6936 11 120624823 to 120624876 53 - miRNA gene microRNA 6936
Tssr112350 11 120624973 to 120624998 25 - TSS region transcription start site region 112350
Mafg 11 120625117 to 120633547 8430 - protein coding gene v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)
Tssr112351 11 120628079 to 120628103 24 - TSS region transcription start site region 112351
Cpgi4318 11 120629397 to 120629775 378 CpG island CpG island 4318
Tssr106329 11 120629584 to 120629603 19 + TSS region transcription start site region 106329
Tssr112352 11 120630097 to 120630123 26 - TSS region transcription start site region 112352
Tssr112353 11 120630126 to 120630160 34 - TSS region transcription start site region 112353
Tssr112354 11 120630516 to 120630537 21 - TSS region transcription start site region 112354
Tssr112355 11 120630556 to 120630588 32 - TSS region transcription start site region 112355
Cpgi4319 11 120632495 to 120634281 1786 CpG island CpG island 4319
Tssr106330 11 120632681 to 120632714 33 + TSS region transcription start site region 106330
Tssr106331 11 120633183 to 120633194 11 + TSS region transcription start site region 106331
Tssr112356 11 120633355 to 120633374 19 - TSS region transcription start site region 112356
Tssr112357 11 120633539 to 120633591 52 - TSS region transcription start site region 112357
Tssr112358 11 120633594 to 120633605 11 - TSS region transcription start site region 112358
Tssr112359 11 120633622 to 120633650 28 - TSS region transcription start site region 112359
Tssr112360 11 120633669 to 120633676 7 - TSS region transcription start site region 112360
Tssr106332 11 120633719 to 120633761 42 + TSS region transcription start site region 106332
Gm17586 11 120633768 to 120635125 1357 + lincRNA gene predicted gene, 17586
Pycr1 11 120635712 to 120643769 8057 - protein coding gene pyrroline-5-carboxylate reductase 1
Cpgi4320 11 120643191 to 120643925 734 CpG island CpG island 4320
Tssr112361 11 120643289 to 120643302 13 - TSS region transcription start site region 112361
Tssr112362 11 120643697 to 120643762 65 - TSS region transcription start site region 112362
Myadml2 11 120646031 to 120648158 2127 - protein coding gene myeloid-associated differentiation marker-like 2
Cpgi4321 11 120647265 to 120647964 699 CpG island CpG island 4321
Myadml2os 11 120647670 to 120657061 9391 + antisense lncRNA gene myeloid-associated differentiation marker-like 2, opposite strand
Tssr112363 11 120648104 to 120648137 33 - TSS region transcription start site region 112363
Notum 11 120653788 to 120661175 7387 - protein coding gene notum palmitoleoyl-protein carboxylesterase