Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:120578421-120628198

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arhgdia 11 120578104 to 120581624 3520 - protein coding gene Rho GDP dissociation inhibitor (GDI) alpha
Tssr112330 11 120578704 to 120578715 11 - TSS region transcription start site region 112330
Tssr112331 11 120578732 to 120578757 25 - TSS region transcription start site region 112331
Tssr112332 11 120578843 to 120578864 21 - TSS region transcription start site region 112332
Tssr112333 11 120578887 to 120578903 16 - TSS region transcription start site region 112333
Tssr112334 11 120578958 to 120578959 1 - TSS region transcription start site region 112334
Tssr112335 11 120578992 to 120579003 11 - TSS region transcription start site region 112335
Tssr112336 11 120579105 to 120579143 38 - TSS region transcription start site region 112336
Tssr112337 11 120579159 to 120579198 39 - TSS region transcription start site region 112337
Tssr112338 11 120579200 to 120579213 13 - TSS region transcription start site region 112338
Tssr112339 11 120579228 to 120579244 16 - TSS region transcription start site region 112339
Tssr112340 11 120579315 to 120579332 17 - TSS region transcription start site region 112340
Tssr112341 11 120579371 to 120579395 24 - TSS region transcription start site region 112341
Cpgi4313 11 120580563 to 120582366 1803 CpG island CpG island 4313
Tssr112342 11 120581196 to 120581237 41 - TSS region transcription start site region 112342
Tssr112343 11 120581537 to 120581548 11 - TSS region transcription start site region 112343
Tssr112344 11 120581553 to 120581632 79 - TSS region transcription start site region 112344
Tssr106319 11 120581661 to 120581700 39 + TSS region transcription start site region 106319
Gm3807 11 120581670 to 120582837 1167 + unclassified gene predicted gene 3807
Gm46304 11 120587138 to 120589958 2820 - lncRNA gene predicted gene, 46304
Alyref 11 120594504 to 120598365 3861 - protein coding gene Aly/REF export factor
Cpgi4314 11 120597292 to 120599175 1883 CpG island CpG island 4314
Tssr112345 11 120598346 to 120598405 59 - TSS region transcription start site region 112345
Anapc11 11 120598421 to 120608198 9777 + protein coding gene anaphase promoting complex subunit 11
Tssr106320 11 120598454 to 120598518 64 + TSS region transcription start site region 106320
Tssr112346 11 120598514 to 120598518 4 - TSS region transcription start site region 112346
Tssr106321 11 120598535 to 120598549 14 + TSS region transcription start site region 106321
Tssr106322 11 120598620 to 120598640 20 + TSS region transcription start site region 106322
Tssr106323 11 120598641 to 120598678 37 + TSS region transcription start site region 106323
Tssr106324 11 120598680 to 120598693 13 + TSS region transcription start site region 106324
Gm39491 11 120601681 to 120604094 2413 + lncRNA gene predicted gene, 39491
Tssr106325 11 120608300 to 120608307 7 + TSS region transcription start site region 106325
Cpgi4315 11 120608311 to 120608974 663 CpG island CpG island 4315
Tssr106326 11 120608469 to 120608487 18 + TSS region transcription start site region 106326
Npb 11 120608477 to 120609093 616 + protein coding gene neuropeptide B
Tssr106327 11 120608492 to 120608502 10 + TSS region transcription start site region 106327
Pcyt2 11 120610087 to 120617936 7849 - protein coding gene phosphate cytidylyltransferase 2, ethanolamine
Tssr106328 11 120617306 to 120617314 8 + TSS region transcription start site region 106328
Cpgi4316 11 120617331 to 120618266 935 CpG island CpG island 4316
Tssr112347 11 120617794 to 120617804 10 - TSS region transcription start site region 112347
Tssr112348 11 120617859 to 120617881 22 - TSS region transcription start site region 112348
Tssr112349 11 120617887 to 120617941 54 - TSS region transcription start site region 112349
Sirt7 11 120618372 to 120625008 6636 - protein coding gene sirtuin 7
Cpgi4317 11 120624399 to 120625453 1054 CpG island CpG island 4317
Mir6936 11 120624823 to 120624876 53 - miRNA gene microRNA 6936
Tssr112350 11 120624973 to 120624998 25 - TSS region transcription start site region 112350
Mafg 11 120625117 to 120633547 8430 - protein coding gene v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)
Tssr112351 11 120628079 to 120628103 24 - TSS region transcription start site region 112351