Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:120350370-120467708

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi4301 11 120347571 to 120350616 3045 CpG island CpG island 4301
0610009L18Rik 11 120348678 to 120351190 2512 + bidirectional promoter lncRNA gene RIKEN cDNA 0610009L18 gene
Tssr106281 11 120361156 to 120361202 46 + TSS region transcription start site region 106281
Tssr106282 11 120361506 to 120361543 37 + TSS region transcription start site region 106282
Fscn2 11 120361534 to 120368168 6634 + protein coding gene fascin actin-bundling protein 2
Tssr106283 11 120366462 to 120366504 42 + TSS region transcription start site region 106283
Faap100 11 120369562 to 120378746 9184 - protein coding gene Fanconi anemia core complex associated protein 100
Cpgi4302 11 120377911 to 120379205 1294 CpG island CpG island 4302
Tssr112295 11 120378692 to 120378779 87 - TSS region transcription start site region 112295
Gm9981 11 120378800 to 120379811 1011 unclassified gene predicted gene 9981
Nploc4 11 120380370 to 120437708 57338 - protein coding gene NPL4 homolog, ubiquitin recognition factor
Tssr112296 11 120404911 to 120404918 7 - TSS region transcription start site region 112296
Cpgi4303 11 120437035 to 120437903 868 CpG island CpG island 4303
Tssr112297 11 120437633 to 120437654 21 - TSS region transcription start site region 112297
Tssr112298 11 120437656 to 120437731 75 - TSS region transcription start site region 112298
Tssr112299 11 120437754 to 120437761 7 - TSS region transcription start site region 112299
Tspan10 11 120442644 to 120446950 4306 + protein coding gene tetraspanin 10
Tssr106284 11 120442653 to 120442701 48 + TSS region transcription start site region 106284
Tssr106285 11 120444311 to 120444323 12 + TSS region transcription start site region 106285
Pde6g 11 120447607 to 120453500 5893 - protein coding gene phosphodiesterase 6G, cGMP-specific, rod, gamma
Tssr112300 11 120453456 to 120453469 13 - TSS region transcription start site region 112300
Tssr112301 11 120453473 to 120453482 9 - TSS region transcription start site region 112301
Oxld1 11 120456601 to 120458063 1462 - protein coding gene oxidoreductase like domain containing 1
Cpgi4304 11 120457516 to 120458548 1032 CpG island CpG island 4304
Tssr112302 11 120458038 to 120458082 44 - TSS region transcription start site region 112302
Tssr106286 11 120458093 to 120458147 54 + TSS region transcription start site region 106286
Ccdc137 11 120458129 to 120464358 6229 + protein coding gene coiled-coil domain containing 137
Arl16 11 120464866 to 120467607 2741 - protein coding gene ADP-ribosylation factor-like 16
Cpgi4305 11 120466777 to 120468201 1424 CpG island CpG island 4305
Tssr112303 11 120467330 to 120467371 41 - TSS region transcription start site region 112303
Tssr112304 11 120467414 to 120467479 65 - TSS region transcription start site region 112304
Hgs 11 120467635 to 120483984 16349 + protein coding gene HGF-regulated tyrosine kinase substrate
Tssr106287 11 120467655 to 120467719 64 + TSS region transcription start site region 106287