Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:119868332-119988630

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rptor 11 119602905 to 119899576 296671 + protein coding gene regulatory associated protein of MTOR, complex 1
Tssr106257 11 119876004 to 119876017 13 + TSS region transcription start site region 106257
Gm39485 11 119908597 to 119913458 4861 - lncRNA gene predicted gene, 39485
Cpgi4277 11 119913252 to 119914525 1273 CpG island CpG island 4277
Tssr106258 11 119913423 to 119913434 11 + TSS region transcription start site region 106258
Chmp6 11 119913446 to 119919552 6106 + protein coding gene charged multivesicular body protein 6
Tssr106259 11 119913802 to 119913854 52 + TSS region transcription start site region 106259
Tssr106260 11 119916303 to 119916337 34 + TSS region transcription start site region 106260
Tssr106261 11 119916647 to 119916683 36 + TSS region transcription start site region 106261
Tssr3753 11 119916696 to 119916707 11 + TSS region transcription start site region 3753
Tssr112240 11 119917181 to 119917206 25 - TSS region transcription start site region 112240
Cpgi4278 11 119928332 to 119928630 298 CpG island CpG island 4278
Tssr106262 11 119928601 to 119928614 13 + TSS region transcription start site region 106262
2900060N18Rik 11 119933009 to 119933534 525 unclassified gene RIKEN cDNA 2900060N18 gene
Gm11767 11 119935803 to 119942698 6895 - antisense lncRNA gene predicted gene 11767
Tssr112241 11 119937427 to 119937444 17 - TSS region transcription start site region 112241
Tssr112242 11 119937446 to 119937466 20 - TSS region transcription start site region 112242
Tssr112243 11 119937807 to 119937818 11 - TSS region transcription start site region 112243
Gm11766 11 119938511 to 119942074 3563 + lincRNA gene predicted gene 11766
Cpgi4279 11 119942160 to 119943866 1706 CpG island CpG island 4279
Tssr112244 11 119942662 to 119942676 14 - TSS region transcription start site region 112244
Baiap2 11 119942768 to 120006782 64014 + protein coding gene brain-specific angiogenesis inhibitor 1-associated protein 2
Tssr106263 11 119943082 to 119943099 17 + TSS region transcription start site region 106263
Tssr112245 11 119943340 to 119943355 15 - TSS region transcription start site region 112245