MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:11980990-12091008

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Grb10	11	11930499 to 12037422	106923	-	protein coding gene	growth factor receptor bound protein 10
Tssr106911	11	12004318 to 12004322	4	-	TSS region	transcription start site region 106911
Tssr106912	11	12009492 to 12009495	3	-	TSS region	transcription start site region 106912
Cpgi2586	11	12025419 to 12027039	1620		CpG island	CpG island 2586
Tssr106913	11	12025849 to 12025883	34	-	TSS region	transcription start site region 106913
Tssr106914	11	12026237 to 12026249	12	-	TSS region	transcription start site region 106914
Tssr106915	11	12026772 to 12026823	51	-	TSS region	transcription start site region 106915
Tssr106916	11	12027958 to 12027973	15	-	TSS region	transcription start site region 106916
Tssr106917	11	12028908 to 12028911	3	-	TSS region	transcription start site region 106917
Tssr3430	11	12035990 to 12036008	18	-	TSS region	transcription start site region 3430
Cpgi2587	11	12036330 to 12038138	1808		CpG island	CpG island 2587
Tssr106918	11	12037349 to 12037360	11	-	TSS region	transcription start site region 106918
Tssr106919	11	12037391 to 12037407	16	-	TSS region	transcription start site region 106919
Tssr100394	11	12037644 to 12037659	15	+	TSS region	transcription start site region 100394
Gm30423	11	12040686 to 12047122	6436	-	lncRNA gene	predicted gene, 30423
Tssr100395	11	12053934 to 12053938	4	+	TSS region	transcription start site region 100395
Gm24036	11	12054148 to 12054303	155	-	snRNA gene	predicted gene, 24036
Tssr106920	11	12054299 to 12054307	8	-	TSS region	transcription start site region 106920