Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:119061400-119161439

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cbx4 11 119077573 to 119086221 8648 - protein coding gene chromobox 4
Gm26508 11 119077573 to 119081865 4292 + lincRNA gene predicted gene, 26508
Tssr106161 11 119081373 to 119081415 42 + TSS region transcription start site region 106161
Tssr106162 11 119081724 to 119081743 19 + TSS region transcription start site region 106162
Cpgi4255 11 119085404 to 119086801 1397 CpG island CpG island 4255
Tssr112206 11 119086231 to 119086250 19 - TSS region transcription start site region 112206
Tssr112207 11 119086266 to 119086284 18 - TSS region transcription start site region 112207
Tssr106163 11 119086819 to 119086825 6 + TSS region transcription start site region 106163
Cpgi4256 11 119087233 to 119087722 489 CpG island CpG island 4256
Tssr106164 11 119089329 to 119089337 8 + TSS region transcription start site region 106164
Tssr106165 11 119089385 to 119089388 3 + TSS region transcription start site region 106165
Cpgi4257 11 119089421 to 119091492 2071 CpG island CpG island 4257
Gm39482 11 119093141 to 119095754 2613 + lncRNA gene predicted gene, 39482
Gm35878 11 119105842 to 119109081 3239 + lncRNA gene predicted gene, 35878
Gm11754 11 119106328 to 119111425 5097 - lincRNA gene predicted gene 11754
Tssr112208 11 119111400 to 119111439 39 - TSS region transcription start site region 112208
Gm11755 11 119121754 to 119126912 5158 - lincRNA gene predicted gene 11755
Tssr106166 11 119126738 to 119126744 6 + TSS region transcription start site region 106166
Tssr112209 11 119133790 to 119133802 12 - TSS region transcription start site region 112209
Tbc1d16 11 119143045 to 119228499 85454 - protein coding gene TBC1 domain family, member 16
Tssr106167 11 119145119 to 119145123 4 + TSS region transcription start site region 106167
Tssr112210 11 119151259 to 119151293 34 - TSS region transcription start site region 112210
Gm26888 11 119151651 to 119156994 5343 + lincRNA gene predicted gene, 26888
Mir6934 11 119154076 to 119154137 61 - miRNA gene microRNA 6934