Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:11905090-12347998

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59 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm25058 11 11913621 to 11913748 127 - snoRNA gene predicted gene, 25058
Grb10 11 11930499 to 12037422 106923 - protein coding gene growth factor receptor bound protein 10
Tssr106894 11 11931634 to 11931645 11 - TSS region transcription start site region 106894
Tssr106895 11 11931697 to 11931710 13 - TSS region transcription start site region 106895
Tssr106896 11 11931722 to 11931735 13 - TSS region transcription start site region 106896
Tssr106897 11 11931760 to 11931844 84 - TSS region transcription start site region 106897
Tssr106898 11 11931880 to 11931897 17 - TSS region transcription start site region 106898
Tssr106899 11 11932253 to 11932264 11 - TSS region transcription start site region 106899
Tssr106900 11 11932563 to 11932572 9 - TSS region transcription start site region 106900
Tssr106901 11 11932843 to 11932855 12 - TSS region transcription start site region 106901
Tssr106902 11 11932887 to 11932903 16 - TSS region transcription start site region 106902
Tssr106903 11 11933372 to 11933406 34 - TSS region transcription start site region 106903
Tssr106904 11 11933458 to 11933498 40 - TSS region transcription start site region 106904
Tssr106905 11 11944906 to 11944921 15 - TSS region transcription start site region 106905
Tssr106906 11 11945540 to 11945559 19 - TSS region transcription start site region 106906
Tssr106907 11 11957048 to 11957086 38 - TSS region transcription start site region 106907
2610104F20Rik 11 11958406 to 11967116 8710 - lncRNA gene RIKEN cDNA 2610104F20 gene
Tssr106908 11 11962026 to 11962037 11 - TSS region transcription start site region 106908
Tssr106909 11 11967558 to 11967609 51 - TSS region transcription start site region 106909
Tssr106910 11 11970540 to 11970554 14 - TSS region transcription start site region 106910
Tssr106911 11 12004318 to 12004322 4 - TSS region transcription start site region 106911
Tssr106912 11 12009492 to 12009495 3 - TSS region transcription start site region 106912
Cpgi2586 11 12025419 to 12027039 1620 CpG island CpG island 2586
Tssr106913 11 12025849 to 12025883 34 - TSS region transcription start site region 106913
Tssr106914 11 12026237 to 12026249 12 - TSS region transcription start site region 106914
Tssr106915 11 12026772 to 12026823 51 - TSS region transcription start site region 106915
Tssr106916 11 12027958 to 12027973 15 - TSS region transcription start site region 106916
Tssr106917 11 12028908 to 12028911 3 - TSS region transcription start site region 106917
Tssr3430 11 12035990 to 12036008 18 - TSS region transcription start site region 3430
Cpgi2587 11 12036330 to 12038138 1808 CpG island CpG island 2587
Tssr106918 11 12037349 to 12037360 11 - TSS region transcription start site region 106918
Tssr106919 11 12037391 to 12037407 16 - TSS region transcription start site region 106919
Tssr100394 11 12037644 to 12037659 15 + TSS region transcription start site region 100394
Gm30423 11 12040686 to 12047122 6436 - lncRNA gene predicted gene, 30423
Tssr100395 11 12053934 to 12053938 4 + TSS region transcription start site region 100395
Gm24036 11 12054148 to 12054303 155 - snRNA gene predicted gene, 24036
Tssr106920 11 12054299 to 12054307 8 - TSS region transcription start site region 106920
Gm12001 11 12125090 to 12127998 2908 - pseudogene predicted gene 12001
Cobl 11 12236676 to 12464960 228284 - protein coding gene cordon-bleu WH2 repeat
Gm39581 11 12242309 to 12263293 20984 + lncRNA gene predicted gene, 39581
Tssr106921 11 12309732 to 12309746 14 - TSS region transcription start site region 106921
Tssr106922 11 12309760 to 12309771 11 - TSS region transcription start site region 106922
Gm12002 11 12313365 to 12346088 32723 + antisense lncRNA gene predicted gene 12002
Tssr100396 11 12314509 to 12314529 20 + TSS region transcription start site region 100396
Egq4 11 12318637 to 68609504 56290867 QTL early growth QTL 4
Eae44 11 12318637 to 40060013 27741376 QTL experimental allergic encephalomyelitis susceptibility 44
Kidpq1 11 12318637 to 68609504 56290867 QTL kidney weight percentage QTL 1
Orq2 11 12318637 to 68609504 56290867 QTL ovulation rate QTL 2
Scfq3 11 12318637 to 68609504 56290867 QTL subcutaneous fat pad weight QTL 3
W10q2 11 12318637 to 68609504 56290867 QTL weight 10 weeks QTL 2
W3q4 11 12318637 to 68609504 56290867 QTL weight 3 weeks QTL 4
Lmrq4 11 12318637 to 69794121 57475484 QTL Leishmania major resistance QTL 4
D11Mit2 11 12318637 to 12318743 106 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 2
Epfq4 11 12318637 to 68609504 56290867 QTL epididymal fat pad weight QTL 4
Tailq1 11 12318637 to 68609504 56290867 QTL tail length QTL 1
W6q3 11 12318637 to 68609504 56290867 QTL weight 6 weeks QTL 3
Lgaq1 11 12318637 to 68609504 56290867 QTL late growth adjusted QTL 1
Lgq1 11 12318637 to 68609504 56290867 QTL late growth QTL 1
Lvrq7 11 118131898 to 12318637 -105813261 QTL liver weight QTL 7