Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:118513028-118873341

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr112179 11 118513250 to 118513269 19 - TSS region transcription start site region 112179
Tssr112180 11 118513341 to 118513350 9 - TSS region transcription start site region 112180
Tssr112181 11 118513354 to 118513375 21 - TSS region transcription start site region 112181
Tssr106157 11 118515784 to 118515787 3 + TSS region transcription start site region 106157
Cpgi4237 11 118568658 to 118570906 2248 CpG island CpG island 4237
Tssr112182 11 118569687 to 118569732 45 - TSS region transcription start site region 112182
Tssr112183 11 118569962 to 118570000 38 - TSS region transcription start site region 112183
Tssr112184 11 118570312 to 118570323 11 - TSS region transcription start site region 112184
D11Mit362.1 11 118580857 to 118580966 109 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 362.1
D11Mit362 11 118580971 to 118581076 105 DNA segment DNA Segment, Chr 11 Massachusetts Institute of Technology 362
9530053I22Rik 11 118591561 to 118592514 953 unclassified gene RIKEN cDNA 9530053I22 gene
Cpgi4238 11 118603227 to 118603589 362 CpG island CpG island 4238
Tssr112185 11 118650994 to 118650997 3 - TSS region transcription start site region 112185
Tssr112186 11 118663521 to 118663522 1 - TSS region transcription start site region 112186
Cpgi4239 11 118693028 to 118693341 313 CpG island CpG island 4239
Cpgi4240 11 118744771 to 118745009 238 CpG island CpG island 4240
C230069I12Rik 11 118760933 to 118764489 3556 unclassified gene RIKEN cDNA C230069I12 gene
Gm11750 11 118791372 to 118793828 2456 + lincRNA gene predicted gene 11750
Tssr112187 11 118796739 to 118796753 14 - TSS region transcription start site region 112187
Tssr112188 11 118797713 to 118797724 11 - TSS region transcription start site region 112188
Tssr112189 11 118797730 to 118797746 16 - TSS region transcription start site region 112189
Tssr112190 11 118797764 to 118797774 10 - TSS region transcription start site region 112190
Tssr112191 11 118797979 to 118797989 10 - TSS region transcription start site region 112191
Gm25040 11 118852723 to 118852788 65 - miRNA gene predicted gene, 25040
Gm11749 11 118866257 to 118867220 963 - sense intronic lncRNA gene predicted gene 11749
Tssr112192 11 118868537 to 118868555 18 - TSS region transcription start site region 112192
Tssr112193 11 118868922 to 118868937 15 - TSS region transcription start site region 112193
Tssr112194 11 118869119 to 118869158 39 - TSS region transcription start site region 112194
Tssr3751 11 118869443 to 118869458 15 - TSS region transcription start site region 3751