Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:118449687-118689732

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
C1qtnf1 11 118428203 to 118449963 21760 + protein coding gene C1q and tumor necrosis factor related protein 1
Gm11747 11 118444200 to 118454995 10795 - antisense lncRNA gene predicted gene 11747
Tssr106151 11 118449838 to 118449847 9 + TSS region transcription start site region 106151
Tssr106152 11 118449873 to 118449886 13 + TSS region transcription start site region 106152
Gm18156 11 118471606 to 118472115 509 - pseudogene predicted gene, 18156
Tssr106153 11 118475826 to 118475836 10 + TSS region transcription start site region 106153
Gm11748 11 118476470 to 118479458 2988 - unclassified non-coding RNA gene predicted gene 11748
Cpgi4235 11 118476670 to 118477509 839 CpG island CpG island 4235
Tssr106154 11 118476824 to 118476830 6 + TSS region transcription start site region 106154
Engase 11 118476829 to 118489209 12380 + protein coding gene endo-beta-N-acetylglucosaminidase
Tssr106155 11 118476934 to 118476994 60 + TSS region transcription start site region 106155
Rbfox3 11 118489762 to 118911597 421835 - protein coding gene RNA binding protein, fox-1 homolog (C. elegans) 3
Tssr106156 11 118490118 to 118490120 2 + TSS region transcription start site region 106156
Tssr112173 11 118491233 to 118491246 13 - TSS region transcription start site region 112173
Tssr112174 11 118494172 to 118494183 11 - TSS region transcription start site region 112174
Tssr112175 11 118494209 to 118494235 26 - TSS region transcription start site region 112175
Tssr112176 11 118495276 to 118495280 4 - TSS region transcription start site region 112176
Tssr112177 11 118495496 to 118495512 16 - TSS region transcription start site region 112177
Cpgi4236 11 118503470 to 118503731 261 CpG island CpG island 4236
Tssr112178 11 118510665 to 118510666 1 - TSS region transcription start site region 112178
Tssr112179 11 118513250 to 118513269 19 - TSS region transcription start site region 112179
Tssr112180 11 118513341 to 118513350 9 - TSS region transcription start site region 112180
Tssr112181 11 118513354 to 118513375 21 - TSS region transcription start site region 112181
Tssr106157 11 118515784 to 118515787 3 + TSS region transcription start site region 106157
Cpgi4237 11 118568658 to 118570906 2248 CpG island CpG island 4237
Tssr112182 11 118569687 to 118569732 45 - TSS region transcription start site region 112182
Tssr112183 11 118569962 to 118570000 38 - TSS region transcription start site region 112183
Tssr112184 11 118570312 to 118570323 11 - TSS region transcription start site region 112184
D11Mit362.1 11 118580857 to 118580966 109 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 362.1
D11Mit362 11 118580971 to 118581076 105 DNA segment DNA Segment, Chr 11 Massachusetts Institute of Technology 362
9530053I22Rik 11 118591561 to 118592514 953 unclassified gene RIKEN cDNA 9530053I22 gene
Cpgi4238 11 118603227 to 118603589 362 CpG island CpG island 4238
Tssr112185 11 118650994 to 118650997 3 - TSS region transcription start site region 112185
Tssr112186 11 118663521 to 118663522 1 - TSS region transcription start site region 112186