Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:118263405-118523419

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139 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Usp36 11 118259651 to 118290244 30593 - protein coding gene ubiquitin specific peptidase 36
Tssr112096 11 118268044 to 118268050 6 - TSS region transcription start site region 112096
Cpgi4231 11 118289462 to 118290687 1225 CpG island CpG island 4231
Tssr112097 11 118290070 to 118290166 96 - TSS region transcription start site region 112097
Tssr112098 11 118290167 to 118290175 8 - TSS region transcription start site region 112098
Tssr112099 11 118290188 to 118290200 12 - TSS region transcription start site region 112099
Tssr112100 11 118290219 to 118290236 17 - TSS region transcription start site region 112100
Timp2 11 118301061 to 118355411 54350 - protein coding gene tissue inhibitor of metalloproteinase 2
Tssr112101 11 118301409 to 118301429 20 - TSS region transcription start site region 112101
Tssr112102 11 118301587 to 118301613 26 - TSS region transcription start site region 112102
Tssr112103 11 118302148 to 118302159 11 - TSS region transcription start site region 112103
Tssr112104 11 118302166 to 118302170 4 - TSS region transcription start site region 112104
Tssr112105 11 118302390 to 118302404 14 - TSS region transcription start site region 112105
Tssr112106 11 118302407 to 118302423 16 - TSS region transcription start site region 112106
Tssr112107 11 118302615 to 118302633 18 - TSS region transcription start site region 112107
Tssr112108 11 118302787 to 118302800 13 - TSS region transcription start site region 112108
Tssr112109 11 118302925 to 118302939 14 - TSS region transcription start site region 112109
Tssr112110 11 118303051 to 118303073 22 - TSS region transcription start site region 112110
Tssr112111 11 118303085 to 118303093 8 - TSS region transcription start site region 112111
Tssr112112 11 118303137 to 118303143 6 - TSS region transcription start site region 112112
Tssr112113 11 118303221 to 118303230 9 - TSS region transcription start site region 112113
Tssr112114 11 118303489 to 118303524 35 - TSS region transcription start site region 112114
Tssr112115 11 118303552 to 118303586 34 - TSS region transcription start site region 112115
Tssr112116 11 118303637 to 118303659 22 - TSS region transcription start site region 112116
Tssr112117 11 118303735 to 118303745 10 - TSS region transcription start site region 112117
Tssr112118 11 118303848 to 118303906 58 - TSS region transcription start site region 112118
Tssr112119 11 118310634 to 118310645 11 - TSS region transcription start site region 112119
Tssr112120 11 118317453 to 118317467 14 - TSS region transcription start site region 112120
Tssr112121 11 118317479 to 118317505 26 - TSS region transcription start site region 112121
Tssr112122 11 118318718 to 118318736 18 - TSS region transcription start site region 112122
Tssr112123 11 118318867 to 118318874 7 - TSS region transcription start site region 112123
Tssr106126 11 118319022 to 118319035 13 + TSS region transcription start site region 106126
Tssr106127 11 118319056 to 118319069 13 + TSS region transcription start site region 106127
Tssr106128 11 118319095 to 118319127 32 + TSS region transcription start site region 106128
Tssr3750 11 118320096 to 118320145 49 + TSS region transcription start site region 3750
Cep295nl 11 118332360 to 118342500 10140 - protein coding gene CEP295 N-terminal like
Tssr106129 11 118333688 to 118333698 10 + TSS region transcription start site region 106129
Tssr112124 11 118340614 to 118340642 28 - TSS region transcription start site region 112124
Tssr112125 11 118342523 to 118342569 46 - TSS region transcription start site region 112125
4921501M06Rik 11 118342606 to 118343563 957 unclassified gene RIKEN cDNA 4921501M06 gene
Tssr106130 11 118342607 to 118342619 12 + TSS region transcription start site region 106130
Tssr106131 11 118342630 to 118342642 12 + TSS region transcription start site region 106131
Cpgi4232 11 118354509 to 118355837 1328 CpG island CpG island 4232
Tssr112126 11 118355317 to 118355334 17 - TSS region transcription start site region 112126
Tssr112127 11 118355369 to 118355377 8 - TSS region transcription start site region 112127
Tssr112128 11 118355496 to 118355497 1 - TSS region transcription start site region 112128
D11Dcr49 11 118392092 to 118392187 95 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 49
Lgals3bp 11 118392752 to 118401931 9179 - protein coding gene lectin, galactoside-binding, soluble, 3 binding protein
Tssr112129 11 118393044 to 118393064 20 - TSS region transcription start site region 112129
Tssr112130 11 118393076 to 118393087 11 - TSS region transcription start site region 112130
Tssr112131 11 118393091 to 118393120 29 - TSS region transcription start site region 112131
Tssr112132 11 118393122 to 118393131 9 - TSS region transcription start site region 112132
Tssr112133 11 118393143 to 118393158 15 - TSS region transcription start site region 112133
Tssr112134 11 118393170 to 118393180 10 - TSS region transcription start site region 112134
Tssr112135 11 118393187 to 118393196 9 - TSS region transcription start site region 112135
Tssr112136 11 118393255 to 118393266 11 - TSS region transcription start site region 112136
Tssr106132 11 118393257 to 118393349 92 + TSS region transcription start site region 106132
Tssr112137 11 118393302 to 118393305 3 - TSS region transcription start site region 112137
Tssr112138 11 118393320 to 118393345 25 - TSS region transcription start site region 112138
Tssr106133 11 118393363 to 118393410 47 + TSS region transcription start site region 106133
Tssr112139 11 118393377 to 118393391 14 - TSS region transcription start site region 112139
Tssr112140 11 118393405 to 118393419 14 - TSS region transcription start site region 112140
Tssr106134 11 118393417 to 118393470 53 + TSS region transcription start site region 106134
Tssr112141 11 118393424 to 118393437 13 - TSS region transcription start site region 112141
Tssr112142 11 118393471 to 118393482 11 - TSS region transcription start site region 112142
Tssr112143 11 118393491 to 118393514 23 - TSS region transcription start site region 112143
Tssr106135 11 118393519 to 118393543 24 + TSS region transcription start site region 106135
Tssr112144 11 118393520 to 118393537 17 - TSS region transcription start site region 112144
Tssr112145 11 118393541 to 118393556 15 - TSS region transcription start site region 112145
Tssr112146 11 118393557 to 118393575 18 - TSS region transcription start site region 112146
Tssr112147 11 118393579 to 118393592 13 - TSS region transcription start site region 112147
Tssr112148 11 118393602 to 118393618 16 - TSS region transcription start site region 112148
Tssr112149 11 118393621 to 118393633 12 - TSS region transcription start site region 112149
Tssr112150 11 118393635 to 118393642 7 - TSS region transcription start site region 112150
Tssr112151 11 118393667 to 118393696 29 - TSS region transcription start site region 112151
Tssr112152 11 118393705 to 118393744 39 - TSS region transcription start site region 112152
Tssr112153 11 118393828 to 118393837 9 - TSS region transcription start site region 112153
Tssr112154 11 118393855 to 118393866 11 - TSS region transcription start site region 112154
Tssr112155 11 118393933 to 118393940 7 - TSS region transcription start site region 112155
Tssr106136 11 118393936 to 118393962 26 + TSS region transcription start site region 106136
Tssr112156 11 118393941 to 118393950 9 - TSS region transcription start site region 112156
Tssr112157 11 118393956 to 118393970 14 - TSS region transcription start site region 112157
Tssr112158 11 118393978 to 118393981 3 - TSS region transcription start site region 112158
Tssr112159 11 118393983 to 118394021 38 - TSS region transcription start site region 112159
Tssr106137 11 118394003 to 118394017 14 + TSS region transcription start site region 106137
Tssr112160 11 118396692 to 118396741 49 - TSS region transcription start site region 112160
Tssr112161 11 118396758 to 118396769 11 - TSS region transcription start site region 112161
Tssr112162 11 118396823 to 118396838 15 - TSS region transcription start site region 112162
Tssr112163 11 118398411 to 118398460 49 - TSS region transcription start site region 112163
Tssr112164 11 118398529 to 118398540 11 - TSS region transcription start site region 112164
Tssr112165 11 118399853 to 118399856 3 - TSS region transcription start site region 112165
Tssr112166 11 118401826 to 118401964 138 - TSS region transcription start site region 112166
Tssr106138 11 118402047 to 118402063 16 + TSS region transcription start site region 106138
Cant1 11 118406289 to 118419086 12797 - protein coding gene calcium activated nucleotidase 1
Tssr112167 11 118415800 to 118415824 24 - TSS region transcription start site region 112167
Tssr112168 11 118415834 to 118415841 7 - TSS region transcription start site region 112168
Cpgi4233 11 118418561 to 118419475 914 CpG island CpG island 4233
Tssr112169 11 118418956 to 118419015 59 - TSS region transcription start site region 112169
Tssr112170 11 118419018 to 118419046 28 - TSS region transcription start site region 112170
Tssr112171 11 118419116 to 118419131 15 - TSS region transcription start site region 112171
Tssr106139 11 118419223 to 118419251 28 + TSS region transcription start site region 106139
Gm35598 11 118422161 to 118428213 6052 - lncRNA gene predicted gene, 35598
Cpgi4234 11 118423609 to 118423820 211 CpG island CpG island 4234
Tssr112172 11 118426513 to 118426519 6 - TSS region transcription start site region 112172
Tssr106140 11 118428115 to 118428141 26 + TSS region transcription start site region 106140
Tssr106141 11 118428150 to 118428191 41 + TSS region transcription start site region 106141
C1qtnf1 11 118428203 to 118449963 21760 + protein coding gene C1q and tumor necrosis factor related protein 1
Tssr106142 11 118428208 to 118428231 23 + TSS region transcription start site region 106142
Tssr106143 11 118428245 to 118428256 11 + TSS region transcription start site region 106143
Tssr106144 11 118428273 to 118428284 11 + TSS region transcription start site region 106144
Tssr106145 11 118428401 to 118428451 50 + TSS region transcription start site region 106145
Tssr106146 11 118428458 to 118428468 10 + TSS region transcription start site region 106146
Tssr106147 11 118428493 to 118428509 16 + TSS region transcription start site region 106147
Tssr106148 11 118428517 to 118428548 31 + TSS region transcription start site region 106148
Tssr106149 11 118433826 to 118433863 37 + TSS region transcription start site region 106149
Tssr106150 11 118443515 to 118443537 22 + TSS region transcription start site region 106150
Gm11747 11 118444200 to 118454995 10795 - antisense lncRNA gene predicted gene 11747
Tssr106151 11 118449838 to 118449847 9 + TSS region transcription start site region 106151
Tssr106152 11 118449873 to 118449886 13 + TSS region transcription start site region 106152
Gm18156 11 118471606 to 118472115 509 - pseudogene predicted gene, 18156
Tssr106153 11 118475826 to 118475836 10 + TSS region transcription start site region 106153
Gm11748 11 118476470 to 118479458 2988 - unclassified non-coding RNA gene predicted gene 11748
Cpgi4235 11 118476670 to 118477509 839 CpG island CpG island 4235
Tssr106154 11 118476824 to 118476830 6 + TSS region transcription start site region 106154
Engase 11 118476829 to 118489209 12380 + protein coding gene endo-beta-N-acetylglucosaminidase
Tssr106155 11 118476934 to 118476994 60 + TSS region transcription start site region 106155
Rbfox3 11 118489762 to 118911597 421835 - protein coding gene RNA binding protein, fox-1 homolog (C. elegans) 3
Tssr106156 11 118490118 to 118490120 2 + TSS region transcription start site region 106156
Tssr112173 11 118491233 to 118491246 13 - TSS region transcription start site region 112173
Tssr112174 11 118494172 to 118494183 11 - TSS region transcription start site region 112174
Tssr112175 11 118494209 to 118494235 26 - TSS region transcription start site region 112175
Tssr112176 11 118495276 to 118495280 4 - TSS region transcription start site region 112176
Tssr112177 11 118495496 to 118495512 16 - TSS region transcription start site region 112177
Cpgi4236 11 118503470 to 118503731 261 CpG island CpG island 4236
Tssr112178 11 118510665 to 118510666 1 - TSS region transcription start site region 112178
Tssr112179 11 118513250 to 118513269 19 - TSS region transcription start site region 112179
Tssr112180 11 118513341 to 118513350 9 - TSS region transcription start site region 112180
Tssr112181 11 118513354 to 118513375 21 - TSS region transcription start site region 112181
Tssr106157 11 118515784 to 118515787 3 + TSS region transcription start site region 106157