Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:118143044-118393050

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90 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr112073 11 118143877 to 118143880 3 - TSS region transcription start site region 112073
Tssr112074 11 118145778 to 118145803 25 - TSS region transcription start site region 112074
Tssr112075 11 118145811 to 118145828 17 - TSS region transcription start site region 112075
Tssr3746 11 118145987 to 118146009 22 + TSS region transcription start site region 3746
Tssr106117 11 118146026 to 118146037 11 + TSS region transcription start site region 106117
Tssr106118 11 118146048 to 118146063 15 + TSS region transcription start site region 106118
Tssr106119 11 118146073 to 118146091 18 + TSS region transcription start site region 106119
Tssr3747 11 118146693 to 118146737 44 + TSS region transcription start site region 3747
Tssr112076 11 118148011 to 118148026 15 - TSS region transcription start site region 112076
Tssr106120 11 118153209 to 118153239 30 + TSS region transcription start site region 106120
Cyth1 11 118164166 to 118248592 84426 - protein coding gene cytohesin 1
Gm24060 11 118180941 to 118181035 94 - snRNA gene predicted gene, 24060
Cpgi4229 11 118202326 to 118202858 532 CpG island CpG island 4229
Tssr112077 11 118202480 to 118202503 23 - TSS region transcription start site region 112077
Tssr112078 11 118202528 to 118202571 43 - TSS region transcription start site region 112078
Tssr112079 11 118202615 to 118202629 14 - TSS region transcription start site region 112079
Tssr112080 11 118202704 to 118202750 46 - TSS region transcription start site region 112080
Tssr112081 11 118202753 to 118202772 19 - TSS region transcription start site region 112081
Gm11737 11 118204712 to 118205179 467 - pseudogene predicted gene 11737
Tssr112082 11 118206443 to 118206448 5 - TSS region transcription start site region 112082
Tssr106121 11 118209932 to 118209938 6 + TSS region transcription start site region 106121
Tssr112083 11 118210106 to 118210110 4 - TSS region transcription start site region 112083
Tssr112084 11 118211849 to 118211870 21 - TSS region transcription start site region 112084
Tssr106122 11 118211977 to 118211984 7 + TSS region transcription start site region 106122
Tssr3748 11 118212047 to 118212052 5 - TSS region transcription start site region 3748
Tssr106123 11 118212246 to 118212260 14 + TSS region transcription start site region 106123
Tssr112085 11 118212702 to 118212711 9 - TSS region transcription start site region 112085
Tssr112086 11 118212715 to 118212748 33 - TSS region transcription start site region 112086
Tssr112087 11 118212759 to 118212775 16 - TSS region transcription start site region 112087
Tssr112088 11 118212832 to 118212841 9 - TSS region transcription start site region 112088
Tssr112089 11 118212849 to 118212852 3 - TSS region transcription start site region 112089
Tssr112090 11 118219033 to 118219047 14 - TSS region transcription start site region 112090
Tssr112091 11 118219054 to 118219062 8 - TSS region transcription start site region 112091
Tssr112092 11 118222754 to 118222792 38 - TSS region transcription start site region 112092
Tssr106124 11 118244230 to 118244244 14 + TSS region transcription start site region 106124
Tssr106125 11 118245341 to 118245349 8 + TSS region transcription start site region 106125
Cpgi4230 11 118247533 to 118249280 1747 CpG island CpG island 4230
Tssr112093 11 118248489 to 118248504 15 - TSS region transcription start site region 112093
Tssr112094 11 118248507 to 118248571 64 - TSS region transcription start site region 112094
Tssr3749 11 118248586 to 118248587 1 - TSS region transcription start site region 3749
Tssr112095 11 118248590 to 118248607 17 - TSS region transcription start site region 112095
Usp36 11 118259651 to 118290244 30593 - protein coding gene ubiquitin specific peptidase 36
Tssr112096 11 118268044 to 118268050 6 - TSS region transcription start site region 112096
Cpgi4231 11 118289462 to 118290687 1225 CpG island CpG island 4231
Tssr112097 11 118290070 to 118290166 96 - TSS region transcription start site region 112097
Tssr112098 11 118290167 to 118290175 8 - TSS region transcription start site region 112098
Tssr112099 11 118290188 to 118290200 12 - TSS region transcription start site region 112099
Tssr112100 11 118290219 to 118290236 17 - TSS region transcription start site region 112100
Timp2 11 118301061 to 118355411 54350 - protein coding gene tissue inhibitor of metalloproteinase 2
Tssr112101 11 118301409 to 118301429 20 - TSS region transcription start site region 112101
Tssr112102 11 118301587 to 118301613 26 - TSS region transcription start site region 112102
Tssr112103 11 118302148 to 118302159 11 - TSS region transcription start site region 112103
Tssr112104 11 118302166 to 118302170 4 - TSS region transcription start site region 112104
Tssr112105 11 118302390 to 118302404 14 - TSS region transcription start site region 112105
Tssr112106 11 118302407 to 118302423 16 - TSS region transcription start site region 112106
Tssr112107 11 118302615 to 118302633 18 - TSS region transcription start site region 112107
Tssr112108 11 118302787 to 118302800 13 - TSS region transcription start site region 112108
Tssr112109 11 118302925 to 118302939 14 - TSS region transcription start site region 112109
Tssr112110 11 118303051 to 118303073 22 - TSS region transcription start site region 112110
Tssr112111 11 118303085 to 118303093 8 - TSS region transcription start site region 112111
Tssr112112 11 118303137 to 118303143 6 - TSS region transcription start site region 112112
Tssr112113 11 118303221 to 118303230 9 - TSS region transcription start site region 112113
Tssr112114 11 118303489 to 118303524 35 - TSS region transcription start site region 112114
Tssr112115 11 118303552 to 118303586 34 - TSS region transcription start site region 112115
Tssr112116 11 118303637 to 118303659 22 - TSS region transcription start site region 112116
Tssr112117 11 118303735 to 118303745 10 - TSS region transcription start site region 112117
Tssr112118 11 118303848 to 118303906 58 - TSS region transcription start site region 112118
Tssr112119 11 118310634 to 118310645 11 - TSS region transcription start site region 112119
Tssr112120 11 118317453 to 118317467 14 - TSS region transcription start site region 112120
Tssr112121 11 118317479 to 118317505 26 - TSS region transcription start site region 112121
Tssr112122 11 118318718 to 118318736 18 - TSS region transcription start site region 112122
Tssr112123 11 118318867 to 118318874 7 - TSS region transcription start site region 112123
Tssr106126 11 118319022 to 118319035 13 + TSS region transcription start site region 106126
Tssr106127 11 118319056 to 118319069 13 + TSS region transcription start site region 106127
Tssr106128 11 118319095 to 118319127 32 + TSS region transcription start site region 106128
Tssr3750 11 118320096 to 118320145 49 + TSS region transcription start site region 3750
Cep295nl 11 118332360 to 118342500 10140 - protein coding gene CEP295 N-terminal like
Tssr106129 11 118333688 to 118333698 10 + TSS region transcription start site region 106129
Tssr112124 11 118340614 to 118340642 28 - TSS region transcription start site region 112124
Tssr112125 11 118342523 to 118342569 46 - TSS region transcription start site region 112125
4921501M06Rik 11 118342606 to 118343563 957 unclassified gene RIKEN cDNA 4921501M06 gene
Tssr106130 11 118342607 to 118342619 12 + TSS region transcription start site region 106130
Tssr106131 11 118342630 to 118342642 12 + TSS region transcription start site region 106131
Cpgi4232 11 118354509 to 118355837 1328 CpG island CpG island 4232
Tssr112126 11 118355317 to 118355334 17 - TSS region transcription start site region 112126
Tssr112127 11 118355369 to 118355377 8 - TSS region transcription start site region 112127
Tssr112128 11 118355496 to 118355497 1 - TSS region transcription start site region 112128
D11Dcr49 11 118392092 to 118392187 95 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 49
Lgals3bp 11 118392752 to 118401931 9179 - protein coding gene lectin, galactoside-binding, soluble, 3 binding protein
Tssr112129 11 118393044 to 118393064 20 - TSS region transcription start site region 112129