Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:118005372-118195373

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pgs1 11 117986297 to 118024011 37714 + protein coding gene phosphatidylglycerophosphate synthase 1
Tssr106115 11 118014544 to 118014577 33 + TSS region transcription start site region 106115
Tssr106116 11 118014591 to 118014594 3 + TSS region transcription start site region 106116
Dnah17 11 118021723 to 118130634 108911 - protein coding gene dynein, axonemal, heavy chain 17
Tssr3745 11 118100372 to 118100373 1 - TSS region transcription start site region 3745
Gm11738 11 118114855 to 118118279 3424 + antisense lncRNA gene predicted gene 11738
Tssr112071 11 118130645 to 118130678 33 - TSS region transcription start site region 112071
Tssr112072 11 118130688 to 118130704 16 - TSS region transcription start site region 112072
D11Mit48.1 11 118131665 to 118131789 124 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 48.1
D11Mit48 11 118131764 to 118131898 134 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 48
Vispl 11 118131764 to 118131898 134 QTL visual placing
Lvrq7 11 118131898 to 12318637 -105813261 QTL liver weight QTL 7
Pregq2 11 118131898 to 94172953 -23958945 QTL pregnancy QTL 2
Dbm2 11 118131898 to 94546357 -23585541 QTL diabetes modifier 2
Gm38514 11 118132022 to 118137775 5753 - lncRNA gene predicted gene, 38514
D11Mit49 11 118142292 to 118142447 155 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 49
D11Mit49.1 11 118142386 to 118142504 118 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 49.1
Tssr112073 11 118143877 to 118143880 3 - TSS region transcription start site region 112073
Tssr112074 11 118145778 to 118145803 25 - TSS region transcription start site region 112074
Tssr112075 11 118145811 to 118145828 17 - TSS region transcription start site region 112075
Tssr3746 11 118145987 to 118146009 22 + TSS region transcription start site region 3746
Tssr106117 11 118146026 to 118146037 11 + TSS region transcription start site region 106117
Tssr106118 11 118146048 to 118146063 15 + TSS region transcription start site region 106118
Tssr106119 11 118146073 to 118146091 18 + TSS region transcription start site region 106119
Tssr3747 11 118146693 to 118146737 44 + TSS region transcription start site region 3747
Tssr112076 11 118148011 to 118148026 15 - TSS region transcription start site region 112076
Tssr106120 11 118153209 to 118153239 30 + TSS region transcription start site region 106120
Cyth1 11 118164166 to 118248592 84426 - protein coding gene cytohesin 1
Gm24060 11 118180941 to 118181035 94 - snRNA gene predicted gene, 24060