Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:117789687-117829703

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmc8 11 117782076 to 117793110 11034 + protein coding gene transmembrane channel-like gene family 8
Gm11724 11 117789897 to 117791313 1416 - antisense lncRNA gene predicted gene 11724
Cpgi4215 11 117789950 to 117790480 530 CpG island CpG island 4215
Tssr106072 11 117790702 to 117790703 1 + TSS region transcription start site region 106072
Tssr106073 11 117790889 to 117790927 38 + TSS region transcription start site region 106073
Tssr106074 11 117792455 to 117792466 11 + TSS region transcription start site region 106074
Cpgi4216 11 117792479 to 117792828 349 CpG island CpG island 4216
6030468B19Rik 11 117797660 to 117807301 9641 + protein coding gene RIKEN cDNA 6030468B19 gene
Tssr106075 11 117797707 to 117797723 16 + TSS region transcription start site region 106075
Tssr106076 11 117797726 to 117797748 22 + TSS region transcription start site region 106076
Tssr106077 11 117798392 to 117798422 30 + TSS region transcription start site region 106077
Cpgi4217 11 117809328 to 117810835 1507 CpG island CpG island 4217
Tssr106078 11 117809653 to 117809685 32 + TSS region transcription start site region 106078
Syngr2 11 117809668 to 117814283 4615 + protein coding gene synaptogyrin 2
Gm20708 11 117809668 to 117839904 30236 + protein coding gene predicted gene 20708
Tssr106079 11 117809687 to 117809703 16 + TSS region transcription start site region 106079
Tssr106080 11 117813292 to 117813303 11 + TSS region transcription start site region 106080
Tssr112040 11 117813377 to 117813437 60 - TSS region transcription start site region 112040
Tssr106081 11 117813413 to 117813421 8 + TSS region transcription start site region 106081
Tssr112041 11 117813442 to 117813466 24 - TSS region transcription start site region 112041
Tssr106082 11 117813447 to 117813464 17 + TSS region transcription start site region 106082
Tssr112042 11 117813481 to 117813495 14 - TSS region transcription start site region 112042
Tssr106083 11 117813658 to 117813679 21 + TSS region transcription start site region 106083
Tssr106084 11 117813701 to 117813736 35 + TSS region transcription start site region 106084
Tssr112043 11 117813723 to 117813770 47 - TSS region transcription start site region 112043
Tssr106085 11 117813755 to 117813766 11 + TSS region transcription start site region 106085
Tssr106086 11 117813815 to 117813835 20 + TSS region transcription start site region 106086
Tk1 11 117815526 to 117826092 10566 - protein coding gene thymidine kinase 1
Tssr112044 11 117819103 to 117819143 40 - TSS region transcription start site region 112044
Cpgi4218 11 117825695 to 117826089 394 CpG island CpG island 4218
Tssr112045 11 117825767 to 117825776 9 - TSS region transcription start site region 112045
Tssr112046 11 117825784 to 117825872 88 - TSS region transcription start site region 112046
Tssr106087 11 117825885 to 117825926 41 + TSS region transcription start site region 106087
Afmid 11 117825924 to 117839908 13984 + protein coding gene arylformamidase
Tssr106088 11 117825933 to 117825969 36 + TSS region transcription start site region 106088
Tssr112047 11 117827397 to 117827406 9 - TSS region transcription start site region 112047
Tssr112048 11 117828271 to 117828289 18 - TSS region transcription start site region 112048
Tssr106089 11 117829370 to 117829382 12 + TSS region transcription start site region 106089
Tssr106090 11 117829490 to 117829510 20 + TSS region transcription start site region 106090